Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC092641.1-201ENST00000440229 772 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC005094.1-201ENST00000440420 368 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC010631.1-201ENST00000474150 156 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC114797.1-201ENST00000514003 728 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 FABP5P5-201ENST00000515537 406 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 SCARNA14-201ENST00000516903 136 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC007115.1-201ENST00000546853 234 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC004024.1-201ENST00000549244 247 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC053481.4-201ENST00000583164 216 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AL606834.2-201ENST00000602954 668 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC068276.1-201ENST00000605793 379 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 RNU6-87P-201ENST00000607561 108 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC073114.1-201ENST00000612027 490 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 AC027309.3-201ENST00000623419 351 ntBASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HERPUD2Q9BSE4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RN7SKP280-201ENST00000364196 304 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RNY3P13-201ENST00000365542 102 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC129850.1-201ENST00000436203 508 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 COX6CP2-201ENST00000444980 225 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 SNRPGP9-201ENST00000456025 225 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RN7SL132P-201ENST00000478131 296 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 VN1R105P-201ENST00000486595 910 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RPL7P47-201ENST00000497299 556 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC010460.1-201ENST00000507087 466 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC026402.1-201ENST00000513642 170 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RPL12P22-201ENST00000519073 490 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC100870.1-201ENST00000522035 505 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 OR5G4P-201ENST00000525251 760 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 CASP1P1-201ENST00000526345 212 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AP002748.2-201ENST00000528671 348 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AL157394.1-201ENST00000562983 1224 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC099489.2-201ENST00000574976 260 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC013553.2-201ENST00000604244 589 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AL137849.1-201ENST00000604767 169 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC138749.5-201ENST00000611461 208 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC004696.1-201ENST00000614345 607 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AC116165.2-201ENST00000616705 206 ntBASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
HERPUD2Q9BSE4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HERPUD2Q9BSE4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HERPUD2Q9BSE4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC073073.2-201ENST00000609827 2578 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 RNY3P10-201ENST00000384764 102 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC098826.1-201ENST00000433943 471 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 AC009961.3-201ENST00000449832 765 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 SSXP1-201ENST00000453640 473 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 HMGN2P13-201ENST00000476476 274 ntBASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HERPUD2Q9BSE4 RNA5SP291-201ENST00000517222 105 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms