Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 AL669831.1-202ENST00000428504 417 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 SNAP23P1-201ENST00000433229 246 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 Z92846.1-201ENST00000456203 268 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 RNU7-152P-201ENST00000458982 64 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 Y_RNA.653-201ENST00000459091 95 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 LINC00901.1-201ENST00000617252 152 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC068870.2-201ENST00000620635 389 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC244517.12-201ENST00000623581 663 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC073869.10-201ENST00000642016 354 ntBASIC4.76□□□□□ -1.65
TM9SF2Q99805 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF2Q99805 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF2Q99805 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF2Q99805 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF2Q99805 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TM9SF2Q99805 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
TM9SF2Q99805 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL365440.1-201ENST00000436135 2167 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AC022893.2-201ENST00000564832 3296 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 RNU6-562P-201ENST00000362731 107 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 U3.2-201ENST00000362981 210 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 U8.4-201ENST00000363626 134 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 Y_RNA.187-201ENST00000363918 113 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 RNA5SP235-201ENST00000365411 114 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 Y_RNA.422-201ENST00000384054 114 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 Y_RNA.482-201ENST00000384377 111 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL645927.1-201ENST00000396783 406 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL360182.1-201ENST00000397433 468 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 DUTP5-201ENST00000406790 469 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AC245054.2-201ENST00000415639 319 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 AC104333.2-201ENST00000422630 192 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL160275.3-201ENST00000423876 471 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 SKA2P1-201ENST00000425592 390 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AF228730.2-201ENST00000438784 848 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 RPL32P28-201ENST00000443577 397 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 AC073587.1-201ENST00000447093 876 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 PRDX3P3-201ENST00000447765 522 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AC104472.2-201ENST00000469035 601 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 Y_RNA.711-201ENST00000516993 102 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 AF186190.1-201ENST00000517470 480 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 RNU6-323P-201ENST00000521915 107 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.75□□□□□ -1.65
TM9SF2Q99805 AL355836.1-201ENST00000555951 870 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 FAM157A-202ENST00000615155 405 ntBASIC4.75□□□□□ -1.65
TM9SF2Q99805 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF2Q99805 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF2Q99805 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF2Q99805 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TM9SF2Q99805 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF2Q99805 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF2Q99805 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC009812.4-201ENST00000569134 1805 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC063976.2-201ENST00000425667 3556 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TM9SF2Q99805 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 RNA5SP305-201ENST00000362665 119 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 Y_RNA.135-201ENST00000363439 95 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RNU6-1188P-201ENST00000363795 107 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RNU6-738P-201ENST00000384531 106 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AL590704.1-201ENST00000402856 794 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AL121834.1-202ENST00000404494 277 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 U3.36-201ENST00000408418 213 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RPS12P24-201ENST00000412619 387 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 BX842559.1-201ENST00000419615 532 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 GPM6BP2-201ENST00000432046 144 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 GPM6BP1-201ENST00000446387 144 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 FGF7P3-201ENST00000454645 303 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AL591473.1-201ENST00000464297 313 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AL163540.1-201ENST00000485382 386 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC008953.1-201ENST00000497334 318 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 MLLT10P2-201ENST00000506434 249 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC104136.1-201ENST00000512969 394 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RNU6-1069P-201ENST00000516612 133 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 RNU6-1332P-201ENST00000516666 104 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.74□□□□□ -1.65
TM9SF2Q99805 AP004371.1-201ENST00000525240 214 ntBASIC4.74□□□□□ -1.65
TM9SF2Q99805 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms