Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC092747.3-201ENST00000603769 301 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 Z82243.1-201ENST00000609432 473 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL590099.1-201ENST00000615276 138 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AL596245.1-201ENST00000618994 362 ntBASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNGAP1Q96PV0 AC090337.1-201ENST00000579651 2074 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC032011.1-201ENST00000611703 1549 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC009313.2-201ENST00000417893 1941 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 STX3-208ENST00000641815 3236 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-1287P-201ENST00000362914 107 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.148-201ENST00000363557 117 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-1188P-201ENST00000363795 107 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-1060P-201ENST00000384664 107 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 OR2AS1P-201ENST00000427827 319 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 FABP5P14-201ENST00000437273 393 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.654-201ENST00000497848 106 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC104057.1-201ENST00000515547 497 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-513P-201ENST00000516104 104 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-709P-201ENST00000517257 104 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 FTH1P11-201ENST00000517577 551 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC084783.1-201ENST00000565846 910 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC138761.3-201ENST00000579993 334 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 MIR4424-201ENST00000585257 86 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AF038458.1-201ENST00000588406 262 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 AC012409.4-201ENST00000612923 249 ntBASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SYNGAP1Q96PV0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.111-201ENST00000363248 100 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.149-201ENST00000363558 117 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.193-201ENST00000363979 102 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-601P-201ENST00000384540 107 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RNU1-82P-201ENST00000390851 165 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 UBE2V1P2-201ENST00000397758 440 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RNU2-15P-201ENST00000410692 191 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 OR2AH1P-201ENST00000425717 928 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL451139.1-201ENST00000434718 346 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 H2AFZP5-201ENST00000446960 382 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC093840.1-201ENST00000511599 336 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 MTCO2P24-201ENST00000515611 426 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.661-201ENST00000516003 99 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-1213P-201ENST00000517075 94 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 MIR2116-201ENST00000517221 80 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC093249.4-201ENST00000564755 259 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC023575.1-201ENST00000580510 358 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 MIR4680-201ENST00000580906 66 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 BNIP3P25-201ENST00000596023 559 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL442067.1-201ENST00000613261 223 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AC022418.1-201ENST00000624118 445 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 AL136313.1-201ENST00000624804 202 ntBASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms