Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.58□□□□□ -2.16
CFAP54Q96N23 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CFAP54Q96N23 HMGB3P15-201ENST00000507326 574 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.58□□□□□ -2.16
CFAP54Q96N23 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.58□□□□□ -2.16
CFAP54Q96N23 MIR4506-201ENST00000584693 77 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AC083806.3-201ENST00000614016 455 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 AC000367.1-201ENST00000452711 1766 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 AC005517.2-201ENST00000424673 553 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 AC009961.3-201ENST00000449832 765 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 SEPT7P3-201ENST00000455017 621 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 DUXAP8-207ENST00000456786 622 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CFAP54Q96N23 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 AL121972.1-201ENST00000402023 252 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 HIGD1AP11-201ENST00000438361 280 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 IFNWP4-201ENST00000453148 294 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 TBCAP3-201ENST00000512475 312 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 AP000907.2-201ENST00000530827 353 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.57□□□□□ -2.16
CFAP54Q96N23 OOSP1P2-201ENST00000579644 351 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 AC013444.2-201ENST00000603317 787 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 AC091488.1-201ENST00000604239 660 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 MTND5P7-201ENST00000413558 1798 ntBASIC1.57□□□□□ -2.16
CFAP54Q96N23 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CFAP54Q96N23 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CFAP54Q96N23 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.56□□□□□ -2.16
CFAP54Q96N23 XKRYP4-201ENST00000414395 483 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 XKRYP5-201ENST00000449659 483 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.56□□□□□ -2.16
CFAP54Q96N23 VIS1.1-201ENST00000610517 203 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 AC012150.2-201ENST00000621300 544 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 RPL23AP29-201ENST00000397284 453 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 MTND4P13-201ENST00000402078 1023 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 snoU13.3-201ENST00000459441 104 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 AC090751.1-201ENST00000566966 267 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 AC112191.3-201ENST00000604371 277 ntBASIC1.56□□□□□ -2.16
CFAP54Q96N23 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
CFAP54Q96N23 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CFAP54Q96N23 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC078918.1-201ENST00000498515 228 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 MTCYBP19-201ENST00000517463 1124 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC011472.4-201ENST00000615848 491 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 RPL7P5-201ENST00000471472 736 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 RNA5SP121-201ENST00000516537 101 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 SNORA31.15-201ENST00000516771 132 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC087241.2-201ENST00000535801 324 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC241377.1-201ENST00000619797 406 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 AL021368.2-201ENST00000606125 5352 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 RNU6-984P-201ENST00000363236 109 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 MIR193B-201ENST00000384907 83 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 AC008885.2-201ENST00000509506 930 ntBASIC1.55□□□□□ -2.16
CFAP54Q96N23 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.55□□□□□ -2.16
CFAP54Q96N23 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.54□□□□□ -2.16
CFAP54Q96N23 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 CALM1P1-201ENST00000442082 433 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.54□□□□□ -2.16
CFAP54Q96N23 RNU6-405P-201ENST00000516637 110 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 RNU6-467P-201ENST00000517027 110 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 AC090819.1-201ENST00000523800 1111 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 AC034268.2-201ENST00000571784 482 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 ABI1P1-201ENST00000603375 1120 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 AC092954.1-201ENST00000609121 445 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CFAP54Q96N23 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CFAP54Q96N23 RNU4-13P-201ENST00000364019 141 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 MIR216A-201ENST00000385063 110 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 AC093084.1-201ENST00000424233 687 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 RPS6P12-201ENST00000432491 726 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.54□□□□□ -2.16
CFAP54Q96N23 AC110774.1-201ENST00000623567 2018 ntBASIC1.54□□□□□ -2.16
CFAP54Q96N23 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 MTCO1P48-201ENST00000448024 1096 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 AL021397.1-201ENST00000451806 248 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.53□□□□□ -2.16
CFAP54Q96N23 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.53□□□□□ -2.16
CFAP54Q96N23 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.53□□□□□ -2.16
CFAP54Q96N23 KATNBL1P1-201ENST00000605192 748 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CFAP54Q96N23 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CFAP54Q96N23 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 U3.40-201ENST00000408706 208 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.53□□□□□ -2.16
CFAP54Q96N23 AC105313.1-201ENST00000509121 353 ntBASIC1.53□□□□□ -2.16
CFAP54Q96N23 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms