Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR19A-201ENST00000384878 82 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 RNU11-4P-201ENST00000391149 133 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 MIR1250-201ENST00000408098 113 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 MIR1193-201ENST00000408109 78 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC133104.1-201ENST00000429100 218 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC073464.1-201ENST00000429823 534 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 OR4K11P-201ENST00000431829 904 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 BTF3P10-201ENST00000433415 495 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 MRPS18BP2-201ENST00000434310 759 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 USP9YP15-201ENST00000442391 422 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 TPT1P14-201ENST00000448018 505 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC132479.1-201ENST00000449160 144 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 FGF7P6-202ENST00000451282 293 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC027673.1-201ENST00000456245 405 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL672167.3-201ENST00000465951 960 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 RPL35AP15-201ENST00000468042 339 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 RPL7P47-201ENST00000497299 556 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS50Q96JG6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 RN7SKP21-201ENST00000516503 220 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 RNU6-528P-201ENST00000516926 100 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL845331.3-202ENST00000562856 261 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC012669.1-201ENST00000603209 283 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC073534.2-201ENST00000620377 381 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL356585.4-201ENST00000623078 1229 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AC112484.5-201ENST00000624189 228 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS50Q96JG6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS50Q96JG6 AL157700.1-201ENST00000561973 1432 ntBASIC4.03□□□□□ -1.76
VPS50Q96JG6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS50Q96JG6 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS50Q96JG6 MAPK10-373ENST00000641983 6772 ntBASIC4.03□□□□□ -1.77
VPS50Q96JG6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS50Q96JG6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 Y_RNA.1-201ENST00000352915 104 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 RNU1-14P-201ENST00000362759 152 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 RNU6-1090P-201ENST00000364065 94 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 RNU6-1103P-201ENST00000384150 107 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 RNU2-37P-201ENST00000410695 177 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AL159169.1-201ENST00000421119 127 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC233728.2-201ENST00000425348 757 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 MTCO2P19-201ENST00000427513 598 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 MTND1P2-201ENST00000430604 821 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 RPL23AP52-201ENST00000439311 478 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 RPS4XP4-201ENST00000443195 763 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 NUTF2P7-201ENST00000453086 375 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 MTND1P12-201ENST00000455231 147 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 snoU109.4-201ENST00000458953 143 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 snoU13.3-201ENST00000459441 104 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC021146.1-201ENST00000511202 716 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 RNA5SP49-201ENST00000516450 115 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 RNA5SP337-201ENST00000517007 109 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC022616.3-201ENST00000523940 148 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AP001893.2-201ENST00000526949 202 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 CYCSP29-201ENST00000533731 318 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 SETP2-201ENST00000553886 926 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 OR4K8P-201ENST00000578842 1048 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC090616.5-202ENST00000582111 297 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC093227.2-201ENST00000589357 285 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AL355812.1-201ENST00000603215 216 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AC112230.1-201ENST00000604342 547 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 AL136363.1-201ENST00000605349 337 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS50Q96JG6 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VPS50Q96JG6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS50Q96JG6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.02□□□□□ -1.77
VPS50Q96JG6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS50Q96JG6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms