Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNVU1-3-201ENST00000364313 161 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 RNU4-20P-201ENST00000365601 151 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
BRF1Q92994 SNORD51-201ENST00000384320 80 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.05□□□□□ -1.6
BRF1Q92994 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.05□□□□□ -1.6
BRF1Q92994 AL161631.1-201ENST00000417933 486 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC018644.1-201ENST00000429934 551 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC024082.2-201ENST00000434771 238 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC236972.2-201ENST00000434979 310 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.05□□□□□ -1.6
BRF1Q92994 AC006480.1-201ENST00000449887 378 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 EIF4A1P11-201ENST00000451239 222 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 RPL23AP24-201ENST00000458203 385 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 RPL23AP11-201ENST00000475260 469 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC096576.1-201ENST00000489014 359 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 RN7SL810P-201ENST00000493031 276 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC068305.1-201ENST00000497406 726 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC108145.1-201ENST00000503770 153 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC004062.1-201ENST00000509926 645 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC006064.5-201ENST00000541782 248 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC008745.1-201ENST00000604064 271 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF1Q92994 AL022345.1-201ENST00000607292 135 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AL031666.3-201ENST00000609320 1006 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AL365204.3-201ENST00000612448 685 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AL603758.1-201ENST00000618654 241 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.05□□□□□ -1.6
BRF1Q92994 AC008013.2-202ENST00000637965 364 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 EIF2AP4-201ENST00000424793 1781 ntBASIC5.05□□□□□ -1.6
BRF1Q92994 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
BRF1Q92994 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRF1Q92994 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
BRF1Q92994 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
BRF1Q92994 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
BRF1Q92994 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.04□□□□□ -1.6
BRF1Q92994 RNA5SP28-201ENST00000363841 119 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 Y_RNA.384-201ENST00000383909 102 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 RNU6-38P-201ENST00000384085 107 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
BRF1Q92994 SNORD37.1-201ENST00000390968 65 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 U3.22-201ENST00000391120 215 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 RNU6-903P-201ENST00000391270 109 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 RNU4-26P-201ENST00000410270 107 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 RNU2-29P-201ENST00000410423 189 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 EIF4EP1-201ENST00000422311 642 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC016696.1-201ENST00000446949 318 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.04□□□□□ -1.6
BRF1Q92994 RNU6-333P-201ENST00000459117 107 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 Y_RNA.632-201ENST00000459189 102 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC087385.1-201ENST00000475062 312 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 RPS15AP36-201ENST00000492022 382 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC116562.3-201ENST00000506136 177 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.04□□□□□ -1.6
BRF1Q92994 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 RNU7-51P-201ENST00000516560 62 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC022790.1-201ENST00000522872 204 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC068587.5-201ENST00000528506 175 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.04□□□□□ -1.6
BRF1Q92994 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 MIR4424-201ENST00000585257 86 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC008638.3-201ENST00000603341 463 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AP001836.1-201ENST00000604675 523 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC113194.1-201ENST00000606037 500 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 AP001486.3-201ENST00000615334 372 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 uc_338.11-201ENST00000619132 160 ntBASIC5.04□□□□□ -1.6
BRF1Q92994 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
BRF1Q92994 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
BRF1Q92994 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.03□□□□□ -1.6
BRF1Q92994 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.03□□□□□ -1.6
BRF1Q92994 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.03□□□□□ -1.6
BRF1Q92994 RNA5SP52-201ENST00000362448 134 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 RNU6-552P-201ENST00000362869 119 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 Y_RNA.138-201ENST00000363462 102 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 Y_RNA.315-201ENST00000365117 102 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 Y_RNA.387-201ENST00000383918 102 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 RNU6-831P-201ENST00000384548 107 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 RPL37P18-201ENST00000411602 243 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 NDUFB4P5-201ENST00000415445 361 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 CYCSP10-201ENST00000417973 294 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 OR1AA1P-201ENST00000419597 916 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.03□□□□□ -1.6
BRF1Q92994 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.03□□□□□ -1.6
BRF1Q92994 RPL23AP38-201ENST00000423801 469 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AL353729.1-201ENST00000425044 720 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 AL157831.1-201ENST00000426134 473 ntBASIC5.03□□□□□ -1.6
BRF1Q92994 RPS29P17-201ENST00000430795 166 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms