Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RPL23AP20-201ENST00000447965 421 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC233279.1-201ENST00000455300 423 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNU6-711P-201ENST00000517255 106 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RPL21P5-201ENST00000554662 472 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC105137.2-201ENST00000569073 466 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC024560.3-201ENST00000608482 349 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MIR6864-201ENST00000617935 70 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC073348.1-201ENST00000623002 331 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC026241.1-201ENST00000517873 2142 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 EIF5P1-201ENST00000400019 1231 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNA5SP82-201ENST00000516707 92 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC090616.5-202ENST00000582111 297 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 APOOP1-201ENST00000604695 592 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC073111.2-201ENST00000605657 1075 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RN7SKP226-201ENST00000364912 300 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNU2-68P-201ENST00000410878 191 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL035407.2-201ENST00000454090 378 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC022616.2-201ENST00000523185 300 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MTCO1P47-201ENST00000523889 1271 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL391834.1-201ENST00000609609 560 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC093591.3-201ENST00000634516 308 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MIR219B-201ENST00000637023 88 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RNU6-392P-201ENST00000364926 101 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 SNORA11.4-201ENST00000408823 129 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 RPL26P37-201ENST00000411983 438 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC004022.2-201ENST00000413824 193 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AL158825.1-201ENST00000414735 521 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 Z73417.1-201ENST00000447373 778 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MTND3P6-201ENST00000485242 339 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 SNORD84-203ENST00000584275 78 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SYNE1Q8NF91 MIR6504-201ENST00000613520 61 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 ZNF271P-202ENST00000465539 1970 ntBASIC0.63□□□□□ -2.31
SYNE1Q8NF91 AC098826.1-201ENST00000433943 471 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 PPP1R2P5-201ENST00000457256 603 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC109486.1-201ENST00000486833 374 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MIR5694-201ENST00000581190 76 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 Y_RNA.783-201ENST00000613546 102 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 UBE2Q2P2-203ENST00000613592 761 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 uc_338.9-201ENST00000617424 182 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 U73479.1-201ENST00000618062 168 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL353748.2-201ENST00000622148 471 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 DBF4P1-201ENST00000412976 1892 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MTCYBP7-201ENST00000419540 1134 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RPL7P37-201ENST00000425095 738 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 WARS2P1-201ENST00000429678 537 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC104332.2-201ENST00000429959 156 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC092685.1-201ENST00000447960 1243 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC135279.1-201ENST00000543493 504 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC135803.1-201ENST00000608748 565 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AP003072.4-201ENST00000624580 310 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL596028.1-201ENST00000326971 197 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 MIR583-201ENST00000384846 75 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RPL31P1-201ENST00000398116 372 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 RNU4-65P-201ENST00000410473 140 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 USP9YP27-201ENST00000418455 438 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 SSXP4-201ENST00000451349 245 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 HMGB1P26-201ENST00000452520 628 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 TTC39CP1-201ENST00000512513 755 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 IGKV2D-36-201ENST00000518643 226 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 PTP4A1P6-201ENST00000531034 478 ntBASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.62□□□□□ -2.31
SYNE1Q8NF91 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms