Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 MIR4446-201ENST00000578505 67 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 COX6CP3-201ENST00000580869 223 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 SNHG22-203ENST00000617833 660 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AP003476.1-201ENST00000623984 516 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC079228.1-201ENST00000624774 1049 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC106858.1-201ENST00000637497 429 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 AC026241.1-201ENST00000517873 2142 ntBASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC65Q8IXS2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC109315.1-201ENST00000584143 1347 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC096664.2-201ENST00000411843 406 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 MTND4P3-201ENST00000417829 541 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 RPL21P32-201ENST00000419877 477 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 DPRXP1-201ENST00000426312 460 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 PSMA6P3-201ENST00000428242 164 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 MTND4LP10-201ENST00000435146 291 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC105272.1-201ENST00000438604 198 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC234775.1-201ENST00000454247 670 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 RPL23AP31-201ENST00000456160 467 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 RPS3AP14-201ENST00000483907 780 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC026412.2-201ENST00000512270 1075 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 MIR4635-201ENST00000583759 79 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 ELOCP29-201ENST00000588193 334 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 DNAJC19P3-201ENST00000594491 331 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AL022067.1-201ENST00000602426 454 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 BNIP3P31-201ENST00000604515 566 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 NUTF2P8-201ENST00000604593 363 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC024560.3-201ENST00000608482 349 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC023158.2-201ENST00000614876 543 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AL158163.2-201ENST00000619110 700 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 AC103798.2-201ENST00000624292 632 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 FO624990.1-201ENST00000636373 85 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 U6.101-201ENST00000637707 76 ntBASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC65Q8IXS2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 SNRPEP3-201ENST00000338402 276 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 MIR483-201ENST00000385070 76 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 RNU6-1176P-201ENST00000390955 107 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 RNU6-1000P-201ENST00000391066 106 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 CYCSP45-201ENST00000402289 315 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AL161449.1-201ENST00000414531 1199 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AL645638.1-201ENST00000440519 361 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC104982.1-201ENST00000478775 574 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC010460.2-201ENST00000509054 677 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 MTCYBP16-201ENST00000509187 1129 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC112206.4-201ENST00000515142 405 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 SNORA19.3-201ENST00000516165 130 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 SNORA31.8-201ENST00000516327 108 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC118942.1-201ENST00000529674 1035 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 MIR3912-201ENST00000577566 105 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC106791.2-201ENST00000604680 391 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC055876.5-201ENST00000605667 259 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AC120349.2-201ENST00000625002 298 ntBASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
CCDC65Q8IXS2 AL672167.1-206ENST00000356293 943 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 RNU6-216P-201ENST00000363282 104 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 RNU4-51P-201ENST00000364206 140 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 snoZ40.1-201ENST00000364540 72 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 RNU6-1074P-201ENST00000383995 104 ntBASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC65Q8IXS2 MTCO1P39-201ENST00000426148 480 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms