Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 YWHAZP7-201ENST00000436906 631 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 ARPC3P5-201ENST00000448802 534 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 BX322784.1-201ENST00000455793 1077 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 SUMO2P2-201ENST00000456482 255 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC117440.1-201ENST00000474107 571 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 RPS3AP14-201ENST00000483907 780 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC239860.2-201ENST00000525886 270 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC126177.3-201ENST00000551839 688 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AC021171.1-201ENST00000603137 706 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 AL596327.1-201ENST00000603629 213 ntBASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC60Q8IWA6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC60Q8IWA6 RNA5SP295-201ENST00000362655 121 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AL590084.2-201ENST00000401481 382 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 RPL5P18-201ENST00000406671 891 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 RNA5SP129-201ENST00000410276 118 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC098592.1-201ENST00000419352 333 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC007742.1-201ENST00000425789 329 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 TXNL1P1-201ENST00000429528 554 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 ELOCP26-201ENST00000436067 329 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 MTCYBP31-201ENST00000438855 1122 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC140076.1-201ENST00000449897 361 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC098826.2-201ENST00000452011 651 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AL445669.2-201ENST00000454425 421 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 USP9YP10-201ENST00000454868 628 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC092754.2-201ENST00000463506 460 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 HMGB1P25-201ENST00000468402 607 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC010285.1-201ENST00000470580 392 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 UBTFL10-201ENST00000528532 562 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 MIR4999-201ENST00000585029 91 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 XIAPP1-201ENST00000603162 600 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AL133507.1-201ENST00000605269 557 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC128687.1-201ENST00000605304 619 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC093732.2-201ENST00000607950 274 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 AC097714.1-201ENST00000511272 1647 ntBASIC3.4□□□□□ -1.87
CCDC60Q8IWA6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 RNU6-28P-201ENST00000362378 107 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 RNU6-289P-201ENST00000364093 107 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 RNU6-805P-201ENST00000365643 106 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 SNORD51-201ENST00000384320 80 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 SKINT1L-201ENST00000401057 817 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 CYCSP45-201ENST00000402289 315 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 RNU6-712P-201ENST00000410558 100 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 RNA5SP107-201ENST00000411358 122 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC60Q8IWA6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms