Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 AC068880.5-201ENST00000624331 290 ntBASIC3.92□□□□□ -1.78
BHLHA9Q7RTU4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BHLHA9Q7RTU4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BHLHA9Q7RTU4 AL122126.1-201ENST00000546905 1318 ntBASIC3.92□□□□□ -1.78
BHLHA9Q7RTU4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
BHLHA9Q7RTU4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.92□□□□□ -1.78
BHLHA9Q7RTU4 AC000367.1-201ENST00000452711 1766 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC018555.1-201ENST00000567548 1980 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-451P-201ENST00000362921 107 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 Y_RNA.296-201ENST00000364930 108 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-359P-201ENST00000365466 108 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 Y_RNA.395-201ENST00000383945 109 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-31P-201ENST00000384388 108 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-1148P-201ENST00000410992 104 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 FCF1P2-201ENST00000415284 583 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AL133547.1-201ENST00000448546 220 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 RNU7-27P-201ENST00000459281 62 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC022034.3-201ENST00000471393 478 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 SNORA67.7-201ENST00000516664 135 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 RNU7-30P-201ENST00000516835 62 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC022868.1-201ENST00000517767 391 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 MYL12BP1-201ENST00000569826 507 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 HNRNPCP4-201ENST00000571636 900 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 MIR3910-1-201ENST00000580936 111 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC007363.1-201ENST00000604736 620 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC024560.3-201ENST00000608482 349 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC00901.1-201ENST00000617252 152 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 uc_338.9-201ENST00000617424 182 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC009237.17-201ENST00000618111 748 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 AL161912.2-201ENST00000565707 3007 ntBASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
BHLHA9Q7RTU4 NSRP1P1-201ENST00000444067 1693 ntBASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 DDX18P3-201ENST00000404856 2007 ntBASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 MTND5P30-201ENST00000452896 1731 ntBASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
BHLHA9Q7RTU4 Y_RNA.259-201ENST00000364619 101 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 RNA5SP51-201ENST00000364750 119 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 SNORD116-29-201ENST00000384516 83 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 MIR554-201ENST00000384874 96 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 RNU6-1106P-201ENST00000390845 107 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 SNORD65C-201ENST00000390962 71 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 CYCSP45-201ENST00000402289 315 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL590704.1-201ENST00000402856 794 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 RPS15AP38-201ENST00000413110 372 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC092647.1-201ENST00000420654 287 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 MTCO2P5-201ENST00000422621 426 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 RAC1P6-201ENST00000423911 575 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 GTF2IP20-201ENST00000431663 360 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL365400.1-201ENST00000431854 640 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL358934.1-201ENST00000432346 324 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AL050341.1-201ENST00000447743 313 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 SNORA84-201ENST00000459229 133 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 AC069499.1-201ENST00000489433 509 ntBASIC3.9□□□□□ -1.79
BHLHA9Q7RTU4 UBA52P3-201ENST00000491303 382 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms