Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC023813.2-201ENST00000564321 469 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 RNU4-51P-201ENST00000364206 140 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC073310.1-201ENST00000423226 1033 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 TPT1P14-201ENST00000448018 505 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AL139286.1-201ENST00000604465 483 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS13CQ709C8 AC116158.1-201ENST00000560231 2129 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 RBBP8P1-201ENST00000449447 1844 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 AL359851.1-201ENST00000569460 4997 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 Y_RNA.433-201ENST00000384089 102 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 USP9YP27-201ENST00000418455 438 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 AL445669.1-201ENST00000426743 755 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 SEPT7P3-201ENST00000455017 621 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC034222.1-201ENST00000494052 532 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC108078.1-201ENST00000508073 725 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC068944.2-201ENST00000610373 403 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC138649.5-201ENST00000637456 137 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 SNORD6-201ENST00000365444 73 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 MIR320A-201ENST00000385302 82 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC069528.1-202ENST00000482888 637 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 RNA5SP436-201ENST00000516020 115 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 FNDC3CP-201ENST00000420795 1155 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 DYNLL1P5-201ENST00000467158 270 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 BNIP3P4-201ENST00000604946 565 ntBASIC1.24□□□□□ -2.21
VPS13CQ709C8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS13CQ709C8 AC131280.1-202ENST00000624067 4211 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 OR4G11P-202ENST00000642116 1414 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 GTF2IP7-202ENST00000436677 309 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 MTCYBP12-201ENST00000440559 1134 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 RNA5SP337-201ENST00000517007 109 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 CYP3A137P-201ENST00000562436 69 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC006254.3-201ENST00000603353 884 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC008121.3-201ENST00000618726 433 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13CQ709C8 MTND1P23-201ENST00000416931 372 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 SEC63P1-201ENST00000425785 1258 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 RPL34P26-201ENST00000445636 354 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC114801.2-201ENST00000503825 781 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC109471.1-201ENST00000511631 612 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 TBCAP3-201ENST00000512475 312 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC087854.1-201ENST00000519706 414 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC018690.1-201ENST00000608144 626 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 AC010329.2-201ENST00000595195 2737 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 RPL31P2-201ENST00000413849 377 ntBASIC1.23□□□□□ -2.21
VPS13CQ709C8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.23□□□□□ -2.21
VPS13CQ709C8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS13CQ709C8 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 MIRLET7G-201ENST00000362280 84 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13CQ709C8 RNU6-328P-201ENST00000390887 106 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC240504.1-201ENST00000395709 845 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 RPL35AP22-201ENST00000436855 335 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13CQ709C8 RFC5P1-201ENST00000454419 874 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC096992.1-201ENST00000459808 709 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 ARL2BPP4-201ENST00000506854 471 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13CQ709C8 RPL23AP29-201ENST00000397284 453 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AL022400.1-201ENST00000423946 935 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 CALM1P1-201ENST00000442082 433 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS13CQ709C8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 MTCO1P6-201ENST00000481192 1384 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
VPS13CQ709C8 SNORA68.2-201ENST00000391263 128 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 AC025016.1-201ENST00000616746 682 ntBASIC1.22□□□□□ -2.21
VPS13CQ709C8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms