Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 Y_RNA.39-201ENST00000362620 98 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 RN7SKP124-201ENST00000364730 341 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 MIR153-1-201ENST00000384914 90 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 MT-TR-201ENST00000387439 65 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 RNU2-23P-201ENST00000410545 195 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 BX842559.1-201ENST00000419615 532 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 SRSF1P1-201ENST00000424058 520 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC073063.1-201ENST00000434352 607 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC011816.1-201ENST00000441346 546 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC105399.1-202ENST00000447303 205 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC090804.1-201ENST00000448870 490 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 CEACAMP6-201ENST00000452007 574 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC108161.1-201ENST00000461060 402 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC012158.1-204ENST00000483430 465 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC068781.1-201ENST00000488231 618 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC009901.1-201ENST00000506703 541 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AL671862.1-201ENST00000515851 349 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC027544.3-201ENST00000535082 757 ntBASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRFN4Q6PJG9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC138393.1-203ENST00000327086 343 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNA5SP319-201ENST00000362768 119 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU4-44P-201ENST00000363050 141 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU6-238P-201ENST00000363313 106 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU6-1059P-201ENST00000363752 98 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNA5SP234-201ENST00000363916 119 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU6-1303P-201ENST00000364841 107 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU6-1329P-201ENST00000365664 107 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 MIR517A-201ENST00000385001 87 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNA5SP241-201ENST00000391326 114 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 HSPE1P8-201ENST00000406997 288 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RPL21P90-201ENST00000415692 466 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 Z92846.1-201ENST00000456203 268 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU7-187P-201ENST00000458985 68 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC091180.1-201ENST00000462104 372 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RPS24P16-201ENST00000497294 392 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 HIGD1AP14-201ENST00000507617 282 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RNU6-120P-201ENST00000516077 103 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 SCARNA16.4-201ENST00000516956 187 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 SNORA31.22-201ENST00000517204 135 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AP004607.2-201ENST00000533949 322 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 BNIP3P5-201ENST00000562290 498 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 SUB1P3-201ENST00000564581 315 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RPL23AP87-202ENST00000573039 466 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 RN7SL652P-201ENST00000577769 300 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC108738.1-201ENST00000603703 237 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 NUTF2P8-201ENST00000604593 363 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 ELOCP5-201ENST00000604924 333 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC018889.1-201ENST00000605372 397 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AC000068.2-201ENST00000608816 460 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AL606534.2-204ENST00000635008 178 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 EOGT-210ENST00000615922 1931 ntBASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LRFN4Q6PJG9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms