Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP39Q53GS9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.48□□□□□ -1.69
USP39Q53GS9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.48□□□□□ -1.69
USP39Q53GS9 AC026464.5-201ENST00000562497 722 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.48□□□□□ -1.69
USP39Q53GS9 LARP7P2-201ENST00000575306 125 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 MIR5186-201ENST00000577504 120 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 MIR3668-201ENST00000582138 75 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
USP39Q53GS9 MAGOH2P-202ENST00000584384 429 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 SNORD39.3-201ENST00000584451 71 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 VN1R107P-201ENST00000601784 209 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 Z84480.1-201ENST00000605131 311 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 AC245389.1-201ENST00000605141 529 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 AL354950.2-201ENST00000617939 290 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 AC112484.5-201ENST00000624189 228 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 CR392039.4-201ENST00000624968 501 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.48□□□□□ -1.69
USP39Q53GS9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.48□□□□□ -1.69
USP39Q53GS9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.48□□□□□ -1.69
USP39Q53GS9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
USP39Q53GS9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USP39Q53GS9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP39Q53GS9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
USP39Q53GS9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP39Q53GS9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP39Q53GS9 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 EOGT-210ENST00000615922 1931 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.48□□□□□ -1.69
USP39Q53GS9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP39Q53GS9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
USP39Q53GS9 AL049780.3-201ENST00000624612 1583 ntBASIC4.48□□□□□ -1.69
USP39Q53GS9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 RPL23AP57-201ENST00000332361 466 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 MIR1-2-201ENST00000384961 85 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 MT-TR-201ENST00000387439 65 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 PPIAP31-201ENST00000405422 495 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 SNORA11F-201ENST00000408237 128 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC009161.1-201ENST00000417306 376 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC007283.2-201ENST00000424739 197 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 DUTP6-201ENST00000425573 462 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 ATP5JP1-201ENST00000431631 322 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC010881.1-201ENST00000433830 235 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC002381.1-201ENST00000447049 280 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC012671.1-201ENST00000451912 203 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 DHFRP3-201ENST00000455595 559 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 RPL7P22-201ENST00000466005 733 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.47□□□□□ -1.69
USP39Q53GS9 S100A11P1-201ENST00000477525 312 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.47□□□□□ -1.69
USP39Q53GS9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC093677.1-201ENST00000514414 678 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.47□□□□□ -1.69
USP39Q53GS9 RNA5SP446-201ENST00000515955 82 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC107934.1-201ENST00000522215 217 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC022861.1-201ENST00000522981 663 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.47□□□□□ -1.69
USP39Q53GS9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.47□□□□□ -1.69
USP39Q53GS9 FRG2DP-202ENST00000566967 323 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 POLR3GP2-201ENST00000588366 668 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC016925.2-201ENST00000605108 242 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AL080274.1-201ENST00000605565 220 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 OR10AB1P-201ENST00000609613 938 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 AC093913.1-201ENST00000614178 329 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.47□□□□□ -1.69
USP39Q53GS9 MIR8059-201ENST00000620427 81 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.47□□□□□ -1.69
USP39Q53GS9 CDRT1-208ENST00000630868 794 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 KPNA2P2-201ENST00000419546 1489 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
USP39Q53GS9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 CPHL1P-201ENST00000461341 3407 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.47□□□□□ -1.69
USP39Q53GS9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.47□□□□□ -1.69
USP39Q53GS9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP39Q53GS9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.46□□□□□ -1.69
USP39Q53GS9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
USP39Q53GS9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.46□□□□□ -1.7
USP39Q53GS9 MIR331-201ENST00000362302 94 ntBASIC4.46□□□□□ -1.7
USP39Q53GS9 RNU1-20P-201ENST00000363314 162 ntBASIC4.46□□□□□ -1.7
USP39Q53GS9 RNU6-1097P-201ENST00000363586 107 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms