Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC126177.3-201ENST00000551839 688 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 DUXAP4-201ENST00000603046 613 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC121334.2-201ENST00000605387 271 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AC016727.1-205ENST00000605437 569 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 HMGB1P50-201ENST00000605814 607 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 Z98200.1-201ENST00000607298 470 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 MIR6500-201ENST00000622700 86 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 DUXAP9-208ENST00000622815 614 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 MIR6863-201ENST00000636112 90 ntBASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.31□□□□□ -1.72
SLC44A4Q53GD3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RNU5E-1-201ENST00000362477 120 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 SNORA63.1-201ENST00000362493 131 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RNA5SP307-201ENST00000362863 116 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 CIR1P3-201ENST00000405137 479 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AL583834.1-201ENST00000406943 343 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 JKAMPP1-201ENST00000413804 919 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC138393.2-201ENST00000414742 246 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC007283.2-201ENST00000424739 197 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RWDD4P2-201ENST00000426392 563 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RPL23AP83-201ENST00000434984 473 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AL451074.3-201ENST00000437709 472 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RPL23AP46-201ENST00000438548 490 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RAC1P7-201ENST00000445367 377 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 TPT1P14-201ENST00000448018 505 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 PSPHP1-201ENST00000450062 261 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RBM43P1-201ENST00000476891 1081 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC010342.1-201ENST00000514047 877 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 RNU6-798P-201ENST00000516912 103 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 CR383656.7-201ENST00000548164 174 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 OR4K8P-201ENST00000578842 1048 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 MIR3682-201ENST00000581338 84 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC005730.3-201ENST00000583067 366 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC005255.1-201ENST00000593748 216 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC068790.3-201ENST00000602988 553 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC011468.4-201ENST00000603942 409 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 LRRC77P-213ENST00000637727 880 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AC008013.2-202ENST00000637965 364 ntBASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A4Q53GD3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL161912.2-201ENST00000565707 3007 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.9-201ENST00000362354 101 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 MIR7-3-201ENST00000384898 110 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 RNU6-780P-201ENST00000391030 104 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 MRPL42P2-201ENST00000403169 426 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 RNU6-712P-201ENST00000410558 100 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 RNU4-6P-201ENST00000410804 122 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 USP12PX-201ENST00000432383 1057 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms