Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MTND5P30-201ENST00000452896 1731 ntBASIC4.68□□□□□ -1.66
YBX1P67809 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.68□□□□□ -1.66
YBX1P67809 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
YBX1P67809 AC007529.1-201ENST00000418574 2178 ntBASIC4.68□□□□□ -1.66
YBX1P67809 API5P2-201ENST00000397055 1498 ntBASIC4.68□□□□□ -1.66
YBX1P67809 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.68□□□□□ -1.66
YBX1P67809 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
YBX1P67809 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 NXPH1-205ENST00000602349 1953 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.67□□□□□ -1.66
YBX1P67809 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 MTND5P28-201ENST00000438005 1594 ntBASIC4.67□□□□□ -1.66
YBX1P67809 KPNA2P1-201ENST00000458289 1591 ntBASIC4.67□□□□□ -1.66
YBX1P67809 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
YBX1P67809 RNA5SP391-201ENST00000363456 119 ntBASIC4.67□□□□□ -1.66
YBX1P67809 RNU6-890P-201ENST00000384121 107 ntBASIC4.67□□□□□ -1.66
YBX1P67809 Y_RNA.574-201ENST00000384766 95 ntBASIC4.67□□□□□ -1.66
YBX1P67809 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
YBX1P67809 CYB5AP4-201ENST00000396692 399 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.67□□□□□ -1.66
YBX1P67809 PDSS1P1-201ENST00000422953 1114 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.67□□□□□ -1.66
YBX1P67809 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.67□□□□□ -1.66
YBX1P67809 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.67□□□□□ -1.66
YBX1P67809 RPL21P23-201ENST00000446654 460 ntBASIC4.67□□□□□ -1.66
YBX1P67809 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 AURKAPS2-201ENST00000454983 333 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
YBX1P67809 AC128713.1-201ENST00000471495 306 ntBASIC4.67□□□□□ -1.66
YBX1P67809 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 AC079140.5-201ENST00000507882 310 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC104806.1-201ENST00000508720 308 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.67□□□□□ -1.66
YBX1P67809 AC009812.2-201ENST00000517657 457 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AP005902.1-201ENST00000521358 186 ntBASIC4.67□□□□□ -1.66
YBX1P67809 FAM60DP-201ENST00000524174 632 ntBASIC4.67□□□□□ -1.66
YBX1P67809 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.67□□□□□ -1.66
YBX1P67809 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 AP001880.2-201ENST00000538233 448 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.67□□□□□ -1.66
YBX1P67809 OR11H5P-201ENST00000554039 926 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 MIR4716-201ENST00000579628 84 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL109918.3-201ENST00000603072 338 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 AC011890.2-201ENST00000613393 294 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL590099.1-201ENST00000615276 138 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AL355365.1-201ENST00000616480 294 ntBASIC4.67□□□□□ -1.66
YBX1P67809 PISRT1.1-201ENST00000616930 107 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC010378.1-201ENST00000619270 362 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC098657.3-201ENST00000620434 263 ntBASIC4.67□□□□□ -1.66
YBX1P67809 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.67□□□□□ -1.66
YBX1P67809 MIR7641-1-201ENST00000627518 61 ntBASIC4.67□□□□□ -1.66
YBX1P67809 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
YBX1P67809 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YBX1P67809 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YBX1P67809 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
YBX1P67809 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.66□□□□□ -1.66
YBX1P67809 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YBX1P67809 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
YBX1P67809 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YBX1P67809 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
YBX1P67809 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
YBX1P67809 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
YBX1P67809 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
YBX1P67809 Y_RNA.463-201ENST00000384271 102 ntBASIC4.66□□□□□ -1.66
YBX1P67809 Y_RNA.576-201ENST00000384781 102 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AL360182.1-201ENST00000397433 468 ntBASIC4.66□□□□□ -1.66
YBX1P67809 MIR450B-201ENST00000401182 78 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AL603908.1-201ENST00000406098 201 ntBASIC4.66□□□□□ -1.66
YBX1P67809 RNU2-36P-201ENST00000410361 191 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.66□□□□□ -1.66
YBX1P67809 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.66□□□□□ -1.66
YBX1P67809 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.66□□□□□ -1.66
YBX1P67809 E2F6P2-201ENST00000420708 748 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.66□□□□□ -1.66
YBX1P67809 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.66□□□□□ -1.66
YBX1P67809 AC092162.1-201ENST00000432828 434 ntBASIC4.66□□□□□ -1.66
YBX1P67809 RPS20P1-201ENST00000434853 354 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.66□□□□□ -1.66
YBX1P67809 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.66□□□□□ -1.66
YBX1P67809 TPT1P12-201ENST00000448968 492 ntBASIC4.66□□□□□ -1.66
YBX1P67809 SUMO1P2-201ENST00000452524 304 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.66□□□□□ -1.66
YBX1P67809 RN7SL817P-201ENST00000480777 288 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.66□□□□□ -1.66
YBX1P67809 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.66□□□□□ -1.66
YBX1P67809 RNU6-189P-201ENST00000516120 101 ntBASIC4.66□□□□□ -1.66
YBX1P67809 RAB9BP1-201ENST00000519581 626 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.66□□□□□ -1.66
YBX1P67809 AC135001.1-201ENST00000544546 283 ntBASIC4.66□□□□□ -1.66
YBX1P67809 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms