Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDL3P58872 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC097262.1-201ENST00000452559 548 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 ZNF114P1-201ENST00000453500 292 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC012181.1-201ENST00000479895 423 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 RPL30P5-201ENST00000494923 336 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC074250.1-201ENST00000511117 192 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDL3P58872 AL355836.1-201ENST00000555951 870 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.34□□□□□ -1.71
RHBDL3P58872 MTND3P12-201ENST00000559068 328 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.34□□□□□ -1.71
RHBDL3P58872 ZNF415P1-201ENST00000582279 1166 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
RHBDL3P58872 AC092354.1-201ENST00000606057 376 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC012360.2-201ENST00000609349 391 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC090970.3-201ENST00000612566 866 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC006111.3-201ENST00000622137 383 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 AC112204.3-201ENST00000623822 332 ntBASIC4.34□□□□□ -1.71
RHBDL3P58872 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.34□□□□□ -1.71
RHBDL3P58872 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDL3P58872 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RHBDL3P58872 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RHBDL3P58872 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RHBDL3P58872 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDL3P58872 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDL3P58872 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 HSPA8P1-201ENST00000425843 1833 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RHBDL3P58872 RNU6-1197P-201ENST00000391183 107 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 UBE2FP1-201ENST00000416536 447 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDL3P58872 VPS26BP1-201ENST00000417155 755 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 BX842559.1-201ENST00000419615 532 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 ATP5HP2-201ENST00000433885 485 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 RPL23AP83-201ENST00000434984 473 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDL3P58872 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.33□□□□□ -1.72
RHBDL3P58872 MTCO1P42-201ENST00000457379 726 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 RPS20P20-201ENST00000460498 340 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 RPL31P60-201ENST00000478450 367 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 RPL32P34-201ENST00000486380 400 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AC055855.1-201ENST00000489563 579 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.33□□□□□ -1.72
RHBDL3P58872 AC118465.1-201ENST00000513820 1271 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 MTCO1P47-201ENST00000523889 1271 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AC103843.2-201ENST00000530523 682 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.33□□□□□ -1.72
RHBDL3P58872 AL133153.1-201ENST00000557756 303 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AF038458.1-201ENST00000588406 262 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 AL359999.1-201ENST00000604513 294 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDL3P58872 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 FAM35BP-202ENST00000497389 3337 ntBASIC4.33□□□□□ -1.72
RHBDL3P58872 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RHBDL3P58872 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RHBDL3P58872 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.33□□□□□ -1.72
RHBDL3P58872 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDL3P58872 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RHBDL3P58872 MIR19A-201ENST00000384878 82 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AC110754.1-201ENST00000399740 601 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.32□□□□□ -1.72
RHBDL3P58872 USP9YP26-201ENST00000421008 661 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDL3P58872 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDL3P58872 MTCO3P45-201ENST00000443036 613 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 ELOCP30-201ENST00000447108 299 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AL590664.1-201ENST00000448065 339 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 RPL36AP33-201ENST00000450395 310 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AC084357.1-201ENST00000473404 255 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 RPL30P14-201ENST00000482744 348 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AL049874.1-201ENST00000489560 388 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 RPS15AP36-201ENST00000492022 382 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 DSTNP2-201ENST00000504533 515 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 HSPD1P15-201ENST00000505573 1122 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 RNA5SP154-201ENST00000516193 111 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 RNU6-759P-201ENST00000516740 103 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 RNU6-201P-201ENST00000517100 61 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.32□□□□□ -1.72
RHBDL3P58872 AC124947.2-202ENST00000552735 133 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AL163153.1-201ENST00000554223 283 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDL3P58872 AC083760.1-201ENST00000589621 670 ntBASIC4.32□□□□□ -1.72
RHBDL3P58872 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDL3P58872 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDL3P58872 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.32□□□□□ -1.72
RHBDL3P58872 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.32□□□□□ -1.72
RHBDL3P58872 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDL3P58872 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDL3P58872 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHBDL3P58872 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms