Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AL139286.2-201ENST00000606838 396 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AC090970.3-201ENST00000612566 866 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 AL592295.2-201ENST00000612578 206 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 TUG1_2.1-201ENST00000614234 87 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NR1H2P55055 AC009509.4-201ENST00000619202 509 ntBASIC3.79□□□□□ -1.8
NR1H2P55055 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NR1H2P55055 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
NR1H2P55055 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H2P55055 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H2P55055 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
NR1H2P55055 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H2P55055 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NR1H2P55055 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H2P55055 MIR372-201ENST00000362225 67 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 Y_RNA.46-201ENST00000362695 102 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 RNA5SP175-201ENST00000364275 119 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 RNU1-132P-201ENST00000364300 164 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H2P55055 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 OR5H15-201ENST00000383696 930 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 SNORA75-201ENST00000384158 137 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 MIR19A-201ENST00000384878 82 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 MIR670-201ENST00000390142 98 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H2P55055 DEFB108C-201ENST00000400154 252 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 TXNP7-201ENST00000406296 293 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 FAT1P1-201ENST00000406588 507 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AC009237.5-201ENST00000414271 501 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 CDK8P2-201ENST00000415020 547 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H2P55055 TMEM167AP1-201ENST00000423409 219 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H2P55055 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H2P55055 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NR1H2P55055 SETP5-201ENST00000437270 562 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 HSFY6P-201ENST00000445573 403 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 PDSS1P2-201ENST00000449397 678 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 RPL23AP14-201ENST00000468281 468 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 RN7SL604P-201ENST00000492589 296 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 AC109464.2-201ENST00000510242 943 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.78□□□□□ -1.8
NR1H2P55055 AP002963.1-201ENST00000530590 184 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AP002453.2-201ENST00000533503 320 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.78□□□□□ -1.8
NR1H2P55055 OR4H12P-201ENST00000556269 907 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 TVP23BP1-201ENST00000557500 617 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AL133153.1-201ENST00000557756 303 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 AC005771.1-201ENST00000585581 349 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AC146944.4-201ENST00000602697 718 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AC121334.2-201ENST00000605387 271 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.78□□□□□ -1.8
NR1H2P55055 AC112204.3-201ENST00000623822 332 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 ZNF807-201ENST00000328088 1707 ntBASIC3.78□□□□□ -1.8
NR1H2P55055 AL158163.1-201ENST00000603915 1649 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H2P55055 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H2P55055 RNU5A-8P-201ENST00000364102 114 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 RNA5SP283-201ENST00000365604 119 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 RN7SKP285-201ENST00000410137 318 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 Y_RNA.598-201ENST00000410480 95 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 HMGN1P14-201ENST00000412459 517 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 HMGB3P23-201ENST00000414981 585 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 UBE2FP1-201ENST00000416536 447 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 RPL21P109-201ENST00000422213 475 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC018630.2-202ENST00000422992 927 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC002075.2-201ENST00000425207 252 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AL353777.1-201ENST00000425552 326 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.77□□□□□ -1.81
NR1H2P55055 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 HMGN2P20-201ENST00000437531 273 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 ELOCP30-201ENST00000447108 299 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 RPL36AP13-201ENST00000457490 317 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 RPS15AP36-201ENST00000492022 382 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 ARL2BPP4-201ENST00000506854 471 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC008958.1-201ENST00000511047 682 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.77□□□□□ -1.81
NR1H2P55055 AC022878.1-201ENST00000530684 149 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 OR8R1P-201ENST00000543943 764 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H2P55055 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 AL121576.1-201ENST00000556055 276 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H2P55055 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H2P55055 SEPT7P9-203ENST00000604116 343 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC112191.3-201ENST00000604371 277 ntBASIC3.77□□□□□ -1.81
NR1H2P55055 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms