Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MTCYBP24-201ENST00000420387 1106 ntBASIC4.1□□□□□ -1.75
COPB1P53618 MTATP6P30-201ENST00000443540 664 ntBASIC4.1□□□□□ -1.75
COPB1P53618 RPS29P31-201ENST00000446147 164 ntBASIC4.1□□□□□ -1.75
COPB1P53618 WASF1P1-201ENST00000447560 1131 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 C1DP4-201ENST00000455429 424 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC087312.1-201ENST00000471411 480 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC023598.1-201ENST00000472521 361 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.1□□□□□ -1.75
COPB1P53618 HMGB1P21-201ENST00000502313 581 ntBASIC4.1□□□□□ -1.75
COPB1P53618 PRDX4P1-201ENST00000507189 574 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.1□□□□□ -1.75
COPB1P53618 AC009646.1-201ENST00000510455 318 ntBASIC4.1□□□□□ -1.75
COPB1P53618 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 SNORD116-26-201ENST00000516006 96 ntBASIC4.1□□□□□ -1.75
COPB1P53618 RNU6-352P-201ENST00000516908 107 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AP001893.2-201ENST00000526949 202 ntBASIC4.1□□□□□ -1.75
COPB1P53618 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC120057.2-201ENST00000571520 271 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 MIR3118-1-201ENST00000581787 76 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.1□□□□□ -1.75
COPB1P53618 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.1□□□□□ -1.75
COPB1P53618 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.1□□□□□ -1.75
COPB1P53618 AC245014.2-201ENST00000603689 287 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC011468.4-201ENST00000603942 409 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC246785.4-201ENST00000605374 287 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AC011816.2-201ENST00000607089 556 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AP001596.2-201ENST00000608410 312 ntBASIC4.1□□□□□ -1.75
COPB1P53618 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.1□□□□□ -1.75
COPB1P53618 uc_338.32-201ENST00000615087 172 ntBASIC4.1□□□□□ -1.75
COPB1P53618 AL732618.1-201ENST00000623251 301 ntBASIC4.1□□□□□ -1.75
COPB1P53618 RNA5SP196-201ENST00000625967 102 ntBASIC4.1□□□□□ -1.75
COPB1P53618 RPS4XP5-202ENST00000449995 1334 ntBASIC4.1□□□□□ -1.75
COPB1P53618 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COPB1P53618 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COPB1P53618 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC092125.1-201ENST00000562568 1995 ntBASIC4.09□□□□□ -1.75
COPB1P53618 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
COPB1P53618 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPB1P53618 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPB1P53618 OR5J1P-201ENST00000313544 939 ntBASIC4.09□□□□□ -1.75
COPB1P53618 RNY4P14-201ENST00000363656 96 ntBASIC4.09□□□□□ -1.75
COPB1P53618 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.09□□□□□ -1.75
COPB1P53618 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
COPB1P53618 RNA5SP424-201ENST00000390988 115 ntBASIC4.09□□□□□ -1.75
COPB1P53618 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPB1P53618 AL590002.1-201ENST00000406554 418 ntBASIC4.09□□□□□ -1.75
COPB1P53618 MIR1277-201ENST00000408536 78 ntBASIC4.09□□□□□ -1.75
COPB1P53618 RNU4-55P-201ENST00000410731 137 ntBASIC4.09□□□□□ -1.75
COPB1P53618 RPL30P2-201ENST00000414021 291 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC127526.1-201ENST00000417526 366 ntBASIC4.09□□□□□ -1.75
COPB1P53618 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.09□□□□□ -1.75
COPB1P53618 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.09□□□□□ -1.75
COPB1P53618 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.09□□□□□ -1.75
COPB1P53618 NEK4P1-201ENST00000433383 879 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.09□□□□□ -1.75
COPB1P53618 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.09□□□□□ -1.75
COPB1P53618 AL049734.2-201ENST00000441066 616 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.09□□□□□ -1.75
COPB1P53618 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.09□□□□□ -1.75
COPB1P53618 RPS20P32-201ENST00000456044 356 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AP1S2P1-201ENST00000457344 379 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.09□□□□□ -1.75
COPB1P53618 RPL7P15-201ENST00000461190 712 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC020593.1-201ENST00000507399 299 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.09□□□□□ -1.75
COPB1P53618 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.09□□□□□ -1.75
COPB1P53618 RN7SKP82-201ENST00000516786 223 ntBASIC4.09□□□□□ -1.75
COPB1P53618 RN7SKP277-201ENST00000516895 283 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC023632.4-201ENST00000517783 191 ntBASIC4.09□□□□□ -1.75
COPB1P53618 OR5AQ1P-201ENST00000527596 927 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.09□□□□□ -1.75
COPB1P53618 AK6P1-201ENST00000540219 478 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.09□□□□□ -1.75
COPB1P53618 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
COPB1P53618 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.09□□□□□ -1.75
COPB1P53618 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.09□□□□□ -1.75
COPB1P53618 AC107954.1-201ENST00000565906 727 ntBASIC4.09□□□□□ -1.75
COPB1P53618 MIR4738-201ENST00000579134 87 ntBASIC4.09□□□□□ -1.75
COPB1P53618 MIR548S-201ENST00000581352 82 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.09□□□□□ -1.75
COPB1P53618 YWHAQP7-201ENST00000603536 658 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC007566.2-201ENST00000603642 413 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC025588.3-201ENST00000604182 274 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC004067.1-201ENST00000608733 700 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AL391813.2-201ENST00000609113 322 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AL355472.4-201ENST00000610233 626 ntBASIC4.09□□□□□ -1.75
COPB1P53618 BX664608.1-201ENST00000610519 487 ntBASIC4.09□□□□□ -1.75
COPB1P53618 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC012150.2-201ENST00000621300 544 ntBASIC4.09□□□□□ -1.75
COPB1P53618 AC009268.2-201ENST00000621925 457 ntBASIC4.09□□□□□ -1.75
COPB1P53618 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
COPB1P53618 AC010149.2-201ENST00000637608 315 ntBASIC4.09□□□□□ -1.75
COPB1P53618 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.09□□□□□ -1.75
COPB1P53618 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.09□□□□□ -1.75
COPB1P53618 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COPB1P53618 AL359893.1-201ENST00000447628 1580 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms