Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.26□□□□□ -1.57
CHRNA4P43681 AC093227.2-201ENST00000589357 285 ntBASIC5.26□□□□□ -1.57
CHRNA4P43681 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.26□□□□□ -1.57
CHRNA4P43681 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA4P43681 MIR6837-201ENST00000620884 64 ntBASIC5.26□□□□□ -1.57
CHRNA4P43681 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.26□□□□□ -1.57
CHRNA4P43681 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA4P43681 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CHRNA4P43681 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA4P43681 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA4P43681 ZNF33CP-201ENST00000432492 2030 ntBASIC5.26□□□□□ -1.57
CHRNA4P43681 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.26□□□□□ -1.57
CHRNA4P43681 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHRNA4P43681 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CHRNA4P43681 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA4P43681 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA4P43681 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA4P43681 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 Y_RNA.43-201ENST00000362670 111 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 RNU1-76P-201ENST00000362903 159 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 RNA5SP223-201ENST00000365174 120 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 RNU5E-6P-201ENST00000365574 115 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHRNA4P43681 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA4P43681 Y_RNA.398-201ENST00000383952 99 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 AC010154.1-201ENST00000425857 269 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA4P43681 Z92846.1-201ENST00000456203 268 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AC005229.2-201ENST00000456995 399 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AC087477.1-201ENST00000465747 340 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 RPS26P39-201ENST00000469206 341 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 RPL7P23-201ENST00000493874 747 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 RPS4XP20-201ENST00000505751 772 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.25□□□□□ -1.57
CHRNA4P43681 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.25□□□□□ -1.57
CHRNA4P43681 AC022884.3-201ENST00000579571 248 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 AL078605.1-201ENST00000603529 500 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AL365222.1-201ENST00000614661 98 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AL590240.4-201ENST00000616908 390 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AC118658.2-201ENST00000618697 459 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA4P43681 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.25□□□□□ -1.57
CHRNA4P43681 SMG1P7-201ENST00000565246 2704 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 TRIM51GP-201ENST00000534741 1350 ntBASIC5.25□□□□□ -1.57
CHRNA4P43681 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHRNA4P43681 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHRNA4P43681 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHRNA4P43681 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CHRNA4P43681 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA4P43681 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CHRNA4P43681 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 RNA5SP258-201ENST00000362750 119 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-1020P-201ENST00000363684 107 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-188P-201ENST00000364207 107 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU1-43P-201ENST00000365052 165 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-596P-201ENST00000365395 98 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 Y_RNA.353-201ENST00000365440 108 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-47P-201ENST00000383866 107 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-317P-201ENST00000384031 107 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-171P-201ENST00000384354 107 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-278P-201ENST00000390945 109 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AL080315.1-201ENST00000406055 466 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RNU6-174P-201ENST00000410406 106 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RN7SKP51-201ENST00000410781 304 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 RPS26P40-201ENST00000435209 294 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA4P43681 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 AC016696.1-201ENST00000446949 318 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 COPS8P2-201ENST00000473228 627 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.24□□□□□ -1.57
CHRNA4P43681 AC084198.1-201ENST00000477747 402 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 RPL7AP10-201ENST00000481016 791 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.24□□□□□ -1.57
CHRNA4P43681 AC069499.1-201ENST00000489433 509 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AP001086.1-201ENST00000494882 321 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.24□□□□□ -1.57
CHRNA4P43681 SEPT14P8-201ENST00000508026 178 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 CYCSP27-201ENST00000527643 293 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AL359219.2-201ENST00000555184 348 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.24□□□□□ -1.57
CHRNA4P43681 HNRNPCP4-201ENST00000571636 900 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 AL512624.1-201ENST00000613638 469 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms