Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.98□□□□□ -1.93
SSR1P43307 RNU2-42P-201ENST00000410697 113 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.98□□□□□ -1.93
SSR1P43307 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.98□□□□□ -1.93
SSR1P43307 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.98□□□□□ -1.93
SSR1P43307 CR769767.1-201ENST00000436337 346 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC079776.3-201ENST00000450665 370 ntBASIC2.98□□□□□ -1.93
SSR1P43307 NIPA2P5-201ENST00000452282 464 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AL359385.1-201ENST00000456509 365 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AP001992.1-205ENST00000462248 379 ntBASIC2.98□□□□□ -1.93
SSR1P43307 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.98□□□□□ -1.93
SSR1P43307 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.98□□□□□ -1.93
SSR1P43307 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.98□□□□□ -1.93
SSR1P43307 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSR1P43307 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.98□□□□□ -1.93
SSR1P43307 AC022080.3-201ENST00000544433 482 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC087897.1-201ENST00000550134 156 ntBASIC2.98□□□□□ -1.93
SSR1P43307 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SSR1P43307 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.98□□□□□ -1.93
SSR1P43307 AC006504.3-201ENST00000586818 523 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC008507.2-201ENST00000588402 1176 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AL592148.2-201ENST00000612210 372 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC104237.2-201ENST00000612456 443 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC084824.4-201ENST00000620106 731 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC010338.1-201ENST00000621823 717 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC087821.2-201ENST00000637086 450 ntBASIC2.98□□□□□ -1.93
SSR1P43307 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
SSR1P43307 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.97□□□□□ -1.93
SSR1P43307 AC008669.1-201ENST00000565823 2178 ntBASIC2.97□□□□□ -1.93
SSR1P43307 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSR1P43307 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSR1P43307 SNORD46.1-201ENST00000364139 104 ntBASIC2.97□□□□□ -1.93
SSR1P43307 SUGT1P1-201ENST00000379514 476 ntBASIC2.97□□□□□ -1.93
SSR1P43307 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SSR1P43307 RPL7P27-201ENST00000403775 720 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.97□□□□□ -1.93
SSR1P43307 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.97□□□□□ -1.93
SSR1P43307 RPL35AP12-201ENST00000425362 338 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.97□□□□□ -1.93
SSR1P43307 AP000949.1-201ENST00000438328 629 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.97□□□□□ -1.93
SSR1P43307 MRPL42P6-201ENST00000486397 371 ntBASIC2.97□□□□□ -1.93
SSR1P43307 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SSR1P43307 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.97□□□□□ -1.93
SSR1P43307 AC010460.2-201ENST00000509054 677 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC008837.1-201ENST00000511513 412 ntBASIC2.97□□□□□ -1.93
SSR1P43307 TBCAP3-201ENST00000512475 312 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC068339.2-201ENST00000534395 618 ntBASIC2.97□□□□□ -1.93
SSR1P43307 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.97□□□□□ -1.93
SSR1P43307 AC092451.2-201ENST00000538746 658 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC018630.1-201ENST00000541376 925 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.97□□□□□ -1.93
SSR1P43307 ZNF861P-201ENST00000588126 639 ntBASIC2.97□□□□□ -1.93
SSR1P43307 VN1R78P-201ENST00000597393 564 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.97□□□□□ -1.93
SSR1P43307 AC010738.1-201ENST00000604970 987 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AC007179.3-201ENST00000604976 235 ntBASIC2.97□□□□□ -1.93
SSR1P43307 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.97□□□□□ -1.93
SSR1P43307 AC096577.2-201ENST00000611455 153 ntBASIC2.97□□□□□ -1.93
SSR1P43307 AL355493.4-201ENST00000618530 292 ntBASIC2.97□□□□□ -1.93
SSR1P43307 MIR3651-201ENST00000630427 90 ntBASIC2.97□□□□□ -1.93
SSR1P43307 ZNF663P-202ENST00000641770 1131 ntBASIC2.97□□□□□ -1.93
SSR1P43307 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.97□□□□□ -1.93
SSR1P43307 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.97□□□□□ -1.93
SSR1P43307 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.97□□□□□ -1.93
SSR1P43307 Z99496.1-201ENST00000469424 1477 ntBASIC2.96□□□□□ -1.93
SSR1P43307 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.96□□□□□ -1.93
SSR1P43307 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
SSR1P43307 AL035425.3-201ENST00000564206 4996 ntBASIC2.96□□□□□ -1.94
SSR1P43307 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSR1P43307 RNU6-1072P-201ENST00000384703 107 ntBASIC2.96□□□□□ -1.94
SSR1P43307 RNU6-443P-201ENST00000384780 107 ntBASIC2.96□□□□□ -1.94
SSR1P43307 AL512633.1-201ENST00000399931 655 ntBASIC2.96□□□□□ -1.94
SSR1P43307 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.96□□□□□ -1.94
SSR1P43307 RNU6-193P-201ENST00000410977 107 ntBASIC2.96□□□□□ -1.94
SSR1P43307 AL161449.1-201ENST00000414531 1199 ntBASIC2.96□□□□□ -1.94
SSR1P43307 AC099677.1-201ENST00000420575 175 ntBASIC2.96□□□□□ -1.94
SSR1P43307 RNF2P1-201ENST00000442955 1010 ntBASIC2.96□□□□□ -1.94
SSR1P43307 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.96□□□□□ -1.94
SSR1P43307 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.96□□□□□ -1.94
SSR1P43307 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SSR1P43307 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.96□□□□□ -1.94
SSR1P43307 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
SSR1P43307 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
SSR1P43307 AC007115.1-201ENST00000546853 234 ntBASIC2.96□□□□□ -1.94
SSR1P43307 MTCYBP27-201ENST00000555160 670 ntBASIC2.96□□□□□ -1.94
SSR1P43307 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.96□□□□□ -1.94
SSR1P43307 AC010872.1-201ENST00000624225 675 ntBASIC2.96□□□□□ -1.94
SSR1P43307 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.96□□□□□ -1.94
SSR1P43307 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSR1P43307 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSR1P43307 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SSR1P43307 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSR1P43307 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SSR1P43307 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SSR1P43307 RNU6-1155P-201ENST00000363554 107 ntBASIC2.95□□□□□ -1.94
SSR1P43307 RNU6-851P-201ENST00000384565 107 ntBASIC2.95□□□□□ -1.94
SSR1P43307 Y_RNA.548-201ENST00000384656 105 ntBASIC2.95□□□□□ -1.94
SSR1P43307 DHFRP6-201ENST00000401776 268 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms