Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.63□□□□□ -2.15
HTTP42858 RNU6-249P-201ENST00000363016 102 ntBASIC1.63□□□□□ -2.15
HTTP42858 MCTS2P-201ENST00000394552 546 ntBASIC1.63□□□□□ -2.15
HTTP42858 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.63□□□□□ -2.15
HTTP42858 AC016727.2-201ENST00000603988 621 ntBASIC1.63□□□□□ -2.15
HTTP42858 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HTTP42858 AC091152.2-201ENST00000591628 2569 ntBASIC1.63□□□□□ -2.15
HTTP42858 AL596028.1-201ENST00000326971 197 ntBASIC1.63□□□□□ -2.15
HTTP42858 RNU6-882P-201ENST00000391025 103 ntBASIC1.63□□□□□ -2.15
HTTP42858 RPL30P3-201ENST00000424262 333 ntBASIC1.63□□□□□ -2.15
HTTP42858 AP002345.1-201ENST00000456493 928 ntBASIC1.63□□□□□ -2.15
HTTP42858 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.63□□□□□ -2.15
HTTP42858 FAM106DP-201ENST00000586416 501 ntBASIC1.63□□□□□ -2.15
HTTP42858 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HTTP42858 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HTTP42858 RNU6-1105P-201ENST00000384774 107 ntBASIC1.62□□□□□ -2.15
HTTP42858 AC114973.1-201ENST00000429057 632 ntBASIC1.62□□□□□ -2.15
HTTP42858 AC090774.1-201ENST00000435925 246 ntBASIC1.62□□□□□ -2.15
HTTP42858 AC008571.1-201ENST00000467232 300 ntBASIC1.62□□□□□ -2.15
HTTP42858 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HTTP42858 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.62□□□□□ -2.15
HTTP42858 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.62□□□□□ -2.15
HTTP42858 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.62□□□□□ -2.15
HTTP42858 HMGB3P26-201ENST00000560051 582 ntBASIC1.62□□□□□ -2.15
HTTP42858 ABI1P1-201ENST00000603375 1120 ntBASIC1.62□□□□□ -2.15
HTTP42858 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
HTTP42858 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HTTP42858 RNA5SP62-201ENST00000363457 110 ntBASIC1.62□□□□□ -2.15
HTTP42858 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.62□□□□□ -2.15
HTTP42858 AL445669.1-201ENST00000426743 755 ntBASIC1.62□□□□□ -2.15
HTTP42858 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HTTP42858 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HTTP42858 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.62□□□□□ -2.15
HTTP42858 AC008885.2-201ENST00000509506 930 ntBASIC1.62□□□□□ -2.15
HTTP42858 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.62□□□□□ -2.15
HTTP42858 AC008687.2-201ENST00000597865 520 ntBASIC1.62□□□□□ -2.15
HTTP42858 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.62□□□□□ -2.15
HTTP42858 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
HTTP42858 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.62□□□□□ -2.15
HTTP42858 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.62□□□□□ -2.15
HTTP42858 AC091544.1-201ENST00000484702 348 ntBASIC1.62□□□□□ -2.15
HTTP42858 RNA5SP436-201ENST00000516020 115 ntBASIC1.62□□□□□ -2.15
HTTP42858 AC007536.1-201ENST00000533382 349 ntBASIC1.62□□□□□ -2.15
HTTP42858 AL139286.1-201ENST00000604465 483 ntBASIC1.62□□□□□ -2.15
HTTP42858 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HTTP42858 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HTTP42858 RPL31P2-201ENST00000413849 377 ntBASIC1.61□□□□□ -2.15
HTTP42858 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.61□□□□□ -2.15
HTTP42858 RPS6P15-201ENST00000431996 751 ntBASIC1.61□□□□□ -2.15
HTTP42858 AC023813.2-201ENST00000564321 469 ntBASIC1.61□□□□□ -2.15
HTTP42858 AC068135.2-201ENST00000569293 1028 ntBASIC1.61□□□□□ -2.15
HTTP42858 AC096772.1-201ENST00000609146 564 ntBASIC1.61□□□□□ -2.15
HTTP42858 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HTTP42858 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.61□□□□□ -2.15
HTTP42858 AC027673.1-201ENST00000456245 405 ntBASIC1.61□□□□□ -2.15
HTTP42858 AC092989.1-201ENST00000481235 277 ntBASIC1.61□□□□□ -2.15
HTTP42858 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
HTTP42858 AL389895.1-201ENST00000554127 252 ntBASIC1.61□□□□□ -2.15
HTTP42858 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.61□□□□□ -2.15
HTTP42858 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.61□□□□□ -2.15
HTTP42858 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HTTP42858 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.61□□□□□ -2.15
HTTP42858 NUP58P1-201ENST00000502546 1738 ntBASIC1.6□□□□□ -2.15
HTTP42858 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
HTTP42858 AL033519.2-201ENST00000403958 392 ntBASIC1.6□□□□□ -2.15
HTTP42858 MTCYBP12-201ENST00000440559 1134 ntBASIC1.6□□□□□ -2.15
HTTP42858 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.6□□□□□ -2.15
HTTP42858 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.6□□□□□ -2.15
HTTP42858 AC114801.2-201ENST00000503825 781 ntBASIC1.6□□□□□ -2.15
HTTP42858 SNORA31.11-201ENST00000516528 139 ntBASIC1.6□□□□□ -2.15
HTTP42858 SULT1C2P1-202ENST00000562418 459 ntBASIC1.6□□□□□ -2.15
HTTP42858 OR4K8P-201ENST00000578842 1048 ntBASIC1.6□□□□□ -2.15
HTTP42858 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HTTP42858 MIRLET7G-201ENST00000362280 84 ntBASIC1.6□□□□□ -2.15
HTTP42858 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HTTP42858 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.6□□□□□ -2.15
HTTP42858 RPS3AP44-201ENST00000425466 790 ntBASIC1.6□□□□□ -2.15
HTTP42858 CKS1BP5-201ENST00000434172 273 ntBASIC1.6□□□□□ -2.15
HTTP42858 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HTTP42858 AC090819.1-201ENST00000523800 1111 ntBASIC1.6□□□□□ -2.15
HTTP42858 MIR5000-201ENST00000577717 103 ntBASIC1.6□□□□□ -2.15
HTTP42858 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.6□□□□□ -2.15
HTTP42858 AC012321.1-201ENST00000561622 1588 ntBASIC1.6□□□□□ -2.15
HTTP42858 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HTTP42858 DDX43P2-201ENST00000604753 1354 ntBASIC1.6□□□□□ -2.15
HTTP42858 Y_RNA.115-201ENST00000363272 98 ntBASIC1.6□□□□□ -2.15
HTTP42858 HMGB3P2-201ENST00000411913 584 ntBASIC1.6□□□□□ -2.15
HTTP42858 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.6□□□□□ -2.15
HTTP42858 AC096992.1-201ENST00000459808 709 ntBASIC1.6□□□□□ -2.15
HTTP42858 DYNLL1P5-201ENST00000467158 270 ntBASIC1.6□□□□□ -2.15
HTTP42858 AC008837.2-201ENST00000513076 418 ntBASIC1.6□□□□□ -2.15
HTTP42858 RNA5SP395-201ENST00000516567 118 ntBASIC1.6□□□□□ -2.15
HTTP42858 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.6□□□□□ -2.15
HTTP42858 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.6□□□□□ -2.15
HTTP42858 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.59□□□□□ -2.15
HTTP42858 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
HTTP42858 SNRPEP2-201ENST00000397592 279 ntBASIC1.59□□□□□ -2.15
HTTP42858 AC005534.2-201ENST00000431047 433 ntBASIC1.59□□□□□ -2.15
HTTP42858 GTF2IP7-202ENST00000436677 309 ntBASIC1.59□□□□□ -2.15
HTTP42858 RPL31P41-201ENST00000477967 372 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms