Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU1-100P-201ENST00000365255 165 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 RNU1-51P-201ENST00000365345 176 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DMBP28068 SNORA80E-201ENST00000384744 137 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AL024474.1-201ENST00000404655 591 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC126182.1-201ENST00000478134 357 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC135721.1-201ENST00000497954 479 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC087808.1-201ENST00000520501 361 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 ARL2BPP5-201ENST00000523141 481 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 CASP1P1-201ENST00000526345 212 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC023824.3-201ENST00000569003 562 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 MIR5092-201ENST00000583139 88 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 AL022099.1-201ENST00000604551 712 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC005858.4-201ENST00000623191 700 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HLA-DMBP28068 SGO1P1-201ENST00000603525 1447 ntBASIC1.9□□□□□ -2.11
HLA-DMBP28068 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AL139276.1-201ENST00000311910 1001 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DMBP28068 MIR16-1-201ENST00000385271 89 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AL139039.1-201ENST00000401900 692 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 ATF1P1-201ENST00000406040 927 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 RNA5SP80-201ENST00000410475 111 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 MTCO2P17-201ENST00000424336 677 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 CR848007.2-201ENST00000424918 787 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC092427.1-202ENST00000430569 476 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 RPS12P2-201ENST00000439728 269 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC010486.1-201ENST00000511793 424 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DMBP28068 HMGB1P14-201ENST00000557424 591 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC104229.1-201ENST00000561364 255 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 MIR5694-201ENST00000581190 76 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AP002826.1-201ENST00000608835 315 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AP000254.1-201ENST00000609934 520 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 RMST_10.1-201ENST00000616309 154 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 AC135776.4-201ENST00000624300 1904 ntBASIC1.89□□□□□ -2.11
HLA-DMBP28068 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DMBP28068 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DMBP28068 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DMBP28068 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC008568.2-201ENST00000623862 2313 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 RNU6-115P-201ENST00000364310 107 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 U8.8-201ENST00000365399 135 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 SET-203ENST00000372688 801 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 SNORA51.6-201ENST00000384151 125 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 RNU6-882P-201ENST00000391025 103 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AL139413.1-201ENST00000421309 217 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC098826.1-201ENST00000433943 471 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 RNF2P1-201ENST00000442955 1010 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC011352.3-201ENST00000505162 593 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC017037.2-201ENST00000513850 890 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 RNU4-29P-201ENST00000515943 174 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 IGLV3-17-201ENST00000519099 244 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 SUB1P1-201ENST00000524415 382 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 OR5AK1P-201ENST00000524837 922 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DMBP28068 AC234778.2-201ENST00000566241 354 ntBASIC1.88□□□□□ -2.11
HLA-DMBP28068 MIR4435-1-201ENST00000582552 80 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms