Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 VN1R80P-201ENST00000597126 338 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.14□□□□□ -2.07
COL11A1P12107 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.14□□□□□ -2.07
COL11A1P12107 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 VTRNA1-1-201ENST00000363120 99 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 RNU6-883P-201ENST00000384597 107 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 RNU6-244P-201ENST00000391028 104 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 SNORA67.5-201ENST00000391036 107 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 USP9YP19-201ENST00000412165 485 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.13□□□□□ -2.07
COL11A1P12107 CR848007.2-201ENST00000424918 787 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC006548.1-201ENST00000427470 102 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 MTND4LP7-201ENST00000431728 294 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 OR4K11P-201ENST00000431829 904 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 ZNF965P-201ENST00000432501 817 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 UBE2V1P5-201ENST00000440070 405 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AL627224.1-201ENST00000448334 444 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 OR52A4P-202ENST00000481634 799 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 AC111193.1-201ENST00000504097 155 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC008628.1-201ENST00000508663 265 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.13□□□□□ -2.07
COL11A1P12107 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.13□□□□□ -2.07
COL11A1P12107 LINC00557-201ENST00000563184 1279 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL11A1P12107 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 RPL23AP88-201ENST00000605759 454 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC092954.1-201ENST00000609121 445 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 CR381572.1-201ENST00000625098 102 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 HPVC1-201ENST00000629899 1198 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 AC103988.1-201ENST00000566382 2177 ntBASIC2.13□□□□□ -2.07
COL11A1P12107 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
COL11A1P12107 Y_RNA.796-201ENST00000364268 102 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 Y_RNA.799-201ENST00000364992 102 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL627390.1-201ENST00000396055 340 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 RNU4-62P-201ENST00000410125 130 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 USP9YP27-201ENST00000418455 438 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.12□□□□□ -2.07
COL11A1P12107 MTND4LP14-201ENST00000429447 288 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.12□□□□□ -2.07
COL11A1P12107 HMGB1P26-201ENST00000452520 628 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.12□□□□□ -2.07
COL11A1P12107 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.12□□□□□ -2.07
COL11A1P12107 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.12□□□□□ -2.07
COL11A1P12107 FABP5P6-201ENST00000510588 409 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 MTCO2P32-201ENST00000514865 403 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC104997.1-201ENST00000519761 717 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 MTND2P7-201ENST00000521337 640 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.12□□□□□ -2.07
COL11A1P12107 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.12□□□□□ -2.07
COL11A1P12107 ISCA1P3-201ENST00000577104 373 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 MIR5089-201ENST00000580047 84 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC124283.4-201ENST00000581815 456 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 OR4H6P-202ENST00000603819 340 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 MIR1264-201ENST00000616374 69 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.12□□□□□ -2.07
COL11A1P12107 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL11A1P12107 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL11A1P12107 RNU2-21P-201ENST00000410368 188 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 RNU2-20P-201ENST00000410425 191 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.12□□□□□ -2.07
COL11A1P12107 MTCO1P43-201ENST00000431831 488 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC109583.1-201ENST00000432156 268 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 MTND2P21-201ENST00000436242 1042 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 NDUFB4P6-201ENST00000436819 366 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL035407.2-201ENST00000454090 378 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL109741.2-201ENST00000455561 343 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 snoU13.18-201ENST00000459483 104 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.12□□□□□ -2.07
COL11A1P12107 AP003049.1-201ENST00000529418 457 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC011611.5-201ENST00000552477 578 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC012414.2-201ENST00000559474 187 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC010735.1-201ENST00000567305 1026 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 MIR4303-201ENST00000581299 66 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.12□□□□□ -2.07
COL11A1P12107 AC008687.2-201ENST00000597865 520 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL671309.1-201ENST00000603750 544 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.12□□□□□ -2.07
COL11A1P12107 AC002064.3-201ENST00000623448 346 ntBASIC2.12□□□□□ -2.07
COL11A1P12107 AP001350.1-201ENST00000601906 1524 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 MTND5P3-201ENST00000438536 1800 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
COL11A1P12107 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL11A1P12107 SNORA7.2-201ENST00000364446 145 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 Z86062.1-201ENST00000406773 777 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 MIR1294-201ENST00000408503 142 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 AC234782.4-201ENST00000417646 1048 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 MTND2P16-201ENST00000419987 799 ntBASIC2.11□□□□□ -2.07
COL11A1P12107 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.11□□□□□ -2.07
COL11A1P12107 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.11□□□□□ -2.07
COL11A1P12107 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms