Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.65□□□□□ -1.67
SNRPA1P09661 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNRPA1P09661 MTND5P1-201ENST00000445440 1375 ntBASIC4.65□□□□□ -1.67
SNRPA1P09661 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.64□□□□□ -1.67
SNRPA1P09661 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNRPA1P09661 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNRPA1P09661 Y_RNA.46-201ENST00000362695 102 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 RNU6-853P-201ENST00000364306 107 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 RHOT1P2-201ENST00000366423 333 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AL024474.1-201ENST00000404655 591 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 RWDD4P2-201ENST00000426392 563 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 RPL31P35-201ENST00000431058 377 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 HSPE1P28-201ENST00000443139 211 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AC104073.1-201ENST00000451988 151 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.64□□□□□ -1.67
SNRPA1P09661 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.64□□□□□ -1.67
SNRPA1P09661 AC026784.1-201ENST00000507986 352 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AC105914.1-201ENST00000511798 226 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 Y_RNA.704-201ENST00000516851 102 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.64□□□□□ -1.67
SNRPA1P09661 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.64□□□□□ -1.67
SNRPA1P09661 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.64□□□□□ -1.67
SNRPA1P09661 AL359314.1-201ENST00000616913 261 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 LINC00901.1-201ENST00000617252 152 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AC006338.1-201ENST00000618453 749 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 MIR6715B-201ENST00000637172 77 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SNRPA1P09661 AL049780.3-201ENST00000624612 1583 ntBASIC4.64□□□□□ -1.67
SNRPA1P09661 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.64□□□□□ -1.67
SNRPA1P09661 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNRPA1P09661 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.63□□□□□ -1.67
SNRPA1P09661 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.63□□□□□ -1.67
SNRPA1P09661 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNRPA1P09661 AC130650.2-201ENST00000618736 2403 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AC073544.1-201ENST00000600110 1595 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNRPA1P09661 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNRPA1P09661 RNY4P14-201ENST00000363656 96 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 RNA5SP267-201ENST00000364893 126 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.63□□□□□ -1.67
SNRPA1P09661 RPL7P25-201ENST00000404151 721 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 JKAMPP1-201ENST00000413804 919 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 HMGB3P20-201ENST00000417997 600 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 DBIP2-201ENST00000419076 262 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.63□□□□□ -1.67
SNRPA1P09661 CYP4F29P-201ENST00000420685 446 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.63□□□□□ -1.67
SNRPA1P09661 MTND4P25-201ENST00000441039 533 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNRPA1P09661 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.63□□□□□ -1.67
SNRPA1P09661 C1DP4-201ENST00000455429 424 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 PABPC1P3-201ENST00000469174 459 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AC104563.1-201ENST00000476147 376 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.63□□□□□ -1.67
SNRPA1P09661 HSPD1P15-201ENST00000505573 1122 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.63□□□□□ -1.67
SNRPA1P09661 AC098799.2-201ENST00000509466 868 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 RNA5SP154-201ENST00000516193 111 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 Y_RNA.672-201ENST00000516289 104 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 RNU6-714P-201ENST00000516963 103 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.63□□□□□ -1.67
SNRPA1P09661 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.63□□□□□ -1.67
SNRPA1P09661 AC034268.2-201ENST00000571784 482 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.63□□□□□ -1.67
SNRPA1P09661 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.63□□□□□ -1.67
SNRPA1P09661 AC006077.1-201ENST00000604746 343 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.63□□□□□ -1.67
SNRPA1P09661 AL365503.1-201ENST00000605247 905 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 AL390208.1-201ENST00000605885 644 ntBASIC4.63□□□□□ -1.67
SNRPA1P09661 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNRPA1P09661 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.63□□□□□ -1.67
SNRPA1P09661 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SNRPA1P09661 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.63□□□□□ -1.67
SNRPA1P09661 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNRPA1P09661 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.63□□□□□ -1.67
SNRPA1P09661 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.62□□□□□ -1.67
SNRPA1P09661 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 MTND5P28-201ENST00000438005 1594 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 BDP1P-201ENST00000582658 1990 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 Y_RNA.1-201ENST00000352915 104 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 RNU6-1279P-201ENST00000383917 103 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 Y_RNA.402-201ENST00000383972 102 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 MIR93-201ENST00000385024 80 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.62□□□□□ -1.67
SNRPA1P09661 BX842559.1-201ENST00000419615 532 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 PIGFP2-201ENST00000421400 651 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SNRPA1P09661 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.62□□□□□ -1.67
SNRPA1P09661 NDUFB1P1-201ENST00000435191 180 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AC105402.2-201ENST00000438503 358 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 DPPA3P1-201ENST00000448050 469 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AC007967.1-201ENST00000455422 1159 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AC008155.2-201ENST00000464337 397 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.62□□□□□ -1.67
SNRPA1P09661 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNRPA1P09661 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 RNU6-528P-201ENST00000516926 100 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms