Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.87□□□□□ -1.79
MMP3P08254 USP9YP13-201ENST00000417797 480 ntBASIC3.87□□□□□ -1.79
MMP3P08254 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.87□□□□□ -1.79
MMP3P08254 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.87□□□□□ -1.79
MMP3P08254 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 SDCBPP1-201ENST00000440192 890 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
MMP3P08254 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.87□□□□□ -1.79
MMP3P08254 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 AC244505.5-201ENST00000443639 207 ntBASIC3.87□□□□□ -1.79
MMP3P08254 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 RPL7P52-201ENST00000449200 742 ntBASIC3.87□□□□□ -1.79
MMP3P08254 HMGB3P22-202ENST00000451823 572 ntBASIC3.87□□□□□ -1.79
MMP3P08254 HMGB1P15-201ENST00000453854 435 ntBASIC3.87□□□□□ -1.79
MMP3P08254 ANP32BP2-201ENST00000454525 545 ntBASIC3.87□□□□□ -1.79
MMP3P08254 SNRPGP5-201ENST00000456003 220 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 AC096751.1-202ENST00000502691 1067 ntBASIC3.87□□□□□ -1.79
MMP3P08254 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.87□□□□□ -1.79
MMP3P08254 AC245505.1-201ENST00000556398 224 ntBASIC3.87□□□□□ -1.79
MMP3P08254 MIR3913-1-201ENST00000577744 102 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AC012493.2-201ENST00000595083 291 ntBASIC3.87□□□□□ -1.79
MMP3P08254 BNIP3P8-201ENST00000597863 560 ntBASIC3.87□□□□□ -1.79
MMP3P08254 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.87□□□□□ -1.79
MMP3P08254 AC008638.3-201ENST00000603341 463 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AL136363.2-201ENST00000604173 851 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AC108747.1-201ENST00000609508 535 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AC005858.4-201ENST00000623191 700 ntBASIC3.87□□□□□ -1.79
MMP3P08254 AL049780.3-201ENST00000624612 1583 ntBASIC3.87□□□□□ -1.79
MMP3P08254 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MMP3P08254 ZNF734P-201ENST00000419494 1534 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 AC027514.1-201ENST00000588561 1603 ntBASIC3.86□□□□□ -1.79
MMP3P08254 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
MMP3P08254 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MMP3P08254 U3.29-201ENST00000391296 212 ntBASIC3.86□□□□□ -1.79
MMP3P08254 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 AIMP1P1-201ENST00000418670 937 ntBASIC3.86□□□□□ -1.79
MMP3P08254 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.86□□□□□ -1.79
MMP3P08254 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.86□□□□□ -1.79
MMP3P08254 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.86□□□□□ -1.79
MMP3P08254 FAM103A2P-201ENST00000444122 354 ntBASIC3.86□□□□□ -1.79
MMP3P08254 SUMO2P2-201ENST00000456482 255 ntBASIC3.86□□□□□ -1.79
MMP3P08254 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 AP001992.1-205ENST00000462248 379 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AC104563.1-201ENST00000476147 376 ntBASIC3.86□□□□□ -1.79
MMP3P08254 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 MTND2P33-201ENST00000506452 1031 ntBASIC3.86□□□□□ -1.79
MMP3P08254 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MMP3P08254 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 NDUFB4P2-201ENST00000509515 391 ntBASIC3.86□□□□□ -1.79
MMP3P08254 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 RNU6-27P-201ENST00000516146 107 ntBASIC3.86□□□□□ -1.79
MMP3P08254 RNU1-103P-201ENST00000516502 125 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.86□□□□□ -1.79
MMP3P08254 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 TPMTP1-201ENST00000592307 737 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AC131902.3-201ENST00000611767 581 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AC013476.2-201ENST00000614456 459 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AC040168.1-201ENST00000623594 991 ntBASIC3.86□□□□□ -1.79
MMP3P08254 SCARNA15.3-201ENST00000626315 122 ntBASIC3.86□□□□□ -1.79
MMP3P08254 SCARNA4.1-201ENST00000628597 123 ntBASIC3.86□□□□□ -1.79
MMP3P08254 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 MIR4496-201ENST00000635896 61 ntBASIC3.86□□□□□ -1.79
MMP3P08254 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
MMP3P08254 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MMP3P08254 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
MMP3P08254 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
MMP3P08254 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
MMP3P08254 AC097714.1-201ENST00000511272 1647 ntBASIC3.85□□□□□ -1.79
MMP3P08254 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
MMP3P08254 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
MMP3P08254 Y_RNA.234-201ENST00000364409 97 ntBASIC3.85□□□□□ -1.79
MMP3P08254 Y_RNA.516-201ENST00000384541 124 ntBASIC3.85□□□□□ -1.79
MMP3P08254 MT-TC-201ENST00000387405 66 ntBASIC3.85□□□□□ -1.79
MMP3P08254 RPS20P2-201ENST00000402520 389 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AL356421.1-201ENST00000403255 413 ntBASIC3.85□□□□□ -1.79
MMP3P08254 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
MMP3P08254 Y_RNA.598-201ENST00000410480 95 ntBASIC3.85□□□□□ -1.79
MMP3P08254 RPL21P109-201ENST00000422213 475 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC005517.2-201ENST00000424673 553 ntBASIC3.85□□□□□ -1.79
MMP3P08254 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC010975.2-201ENST00000427781 588 ntBASIC3.85□□□□□ -1.79
MMP3P08254 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.85□□□□□ -1.79
MMP3P08254 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.85□□□□□ -1.79
MMP3P08254 NANOGNBP1-201ENST00000448444 480 ntBASIC3.85□□□□□ -1.79
MMP3P08254 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms