Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC245036.5-201ENST00000596330 847 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.51□□□□□ -2.17
SPTA1P02549 AL160237.3-201ENST00000604114 1013 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 AC091488.1-201ENST00000604239 660 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 AC073348.1-201ENST00000623002 331 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPTA1P02549 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.51□□□□□ -2.17
SPTA1P02549 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.51□□□□□ -2.17
SPTA1P02549 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 AC098934.3-201ENST00000430450 190 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 USP9YP15-201ENST00000442391 422 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTA1P02549 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTA1P02549 RN7SKP49-201ENST00000516675 260 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 AC008127.2-201ENST00000549925 1075 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.51□□□□□ -2.17
SPTA1P02549 AL137847.3-201ENST00000611521 109 ntBASIC1.51□□□□□ -2.17
SPTA1P02549 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SPTA1P02549 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SPTA1P02549 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.5□□□□□ -2.17
SPTA1P02549 CALM1P1-201ENST00000442082 433 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 DUXAP8-207ENST00000456786 622 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
SPTA1P02549 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 CDC27P3-201ENST00000635418 1910 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 AC010680.1-201ENST00000590024 3590 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 MTND4P1-201ENST00000457501 1466 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 AL691517.1-201ENST00000440833 1235 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.5□□□□□ -2.17
SPTA1P02549 AC079203.1-201ENST00000487972 404 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 GTF2IP9-201ENST00000502460 301 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 FABP5P6-201ENST00000510588 409 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.5□□□□□ -2.17
SPTA1P02549 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.5□□□□□ -2.17
SPTA1P02549 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.5□□□□□ -2.17
SPTA1P02549 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SPTA1P02549 AL592437.2-201ENST00000421655 2434 ntBASIC1.5□□□□□ -2.17
SPTA1P02549 RNA5SP62-201ENST00000363457 110 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.49□□□□□ -2.17
SPTA1P02549 EIF1AXP1-201ENST00000419267 435 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.49□□□□□ -2.17
SPTA1P02549 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SPTA1P02549 AL590664.1-201ENST00000448065 339 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SPTA1P02549 AL359273.1-201ENST00000510918 627 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.49□□□□□ -2.17
SPTA1P02549 HMGN1P28-201ENST00000521340 364 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AC124283.4-201ENST00000581815 456 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 ABI1P1-201ENST00000603375 1120 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AC048347.1-201ENST00000624621 427 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SPTA1P02549 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SPTA1P02549 Y_RNA.303-201ENST00000364998 94 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SPTA1P02549 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.49□□□□□ -2.17
SPTA1P02549 USP9YP27-201ENST00000418455 438 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.49□□□□□ -2.17
SPTA1P02549 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.49□□□□□ -2.17
SPTA1P02549 AIG1P1-201ENST00000503376 148 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.49□□□□□ -2.17
SPTA1P02549 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.49□□□□□ -2.17
SPTA1P02549 AC008126.1-201ENST00000549019 480 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AC015720.1-201ENST00000565251 277 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 MIR98-201ENST00000606724 119 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AC092954.1-201ENST00000609121 445 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 AC025016.1-201ENST00000616746 682 ntBASIC1.49□□□□□ -2.17
SPTA1P02549 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.49□□□□□ -2.17
SPTA1P02549 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
SPTA1P02549 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SPTA1P02549 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SPTA1P02549 RNU1-93P-201ENST00000364704 169 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 MIR193B-201ENST00000384907 83 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 MIR216A-201ENST00000385063 110 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 PAICSP7-201ENST00000419829 962 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.48□□□□□ -2.17
SPTA1P02549 MTND4LP22-201ENST00000508209 276 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.48□□□□□ -2.17
SPTA1P02549 AC096772.1-201ENST00000609146 564 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPTA1P02549 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SPTA1P02549 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPTA1P02549 RNA5SP139-201ENST00000364340 117 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 DYNLT3P1-201ENST00000378574 347 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 RPL31P2-201ENST00000413849 377 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 SETP8-201ENST00000435341 628 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.48□□□□□ -2.17
SPTA1P02549 TRAV31-201ENST00000502780 342 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 AC108078.1-201ENST00000508073 725 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 RNA5SP402-201ENST00000517148 110 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
SPTA1P02549 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.48□□□□□ -2.17
SPTA1P02549 AC097468.3-201ENST00000607956 456 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 AC008121.3-201ENST00000618726 433 ntBASIC1.48□□□□□ -2.17
SPTA1P02549 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.48□□□□□ -2.17
SPTA1P02549 AL512283.1-201ENST00000606756 1384 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 RNA5SP257-201ENST00000363023 116 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 RNA5SP138-201ENST00000365098 114 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms