Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.14□□□□□ -2.07
CPSF4O95639 MRPL42P4-201ENST00000453267 443 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.14□□□□□ -2.07
CPSF4O95639 AC244505.3-201ENST00000454598 187 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF4O95639 AL109741.2-201ENST00000455561 343 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC010301.1-201ENST00000473936 355 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.14□□□□□ -2.07
CPSF4O95639 AC015908.1-201ENST00000478739 476 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC004924.1-201ENST00000480160 781 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.14□□□□□ -2.07
CPSF4O95639 AC026414.1-201ENST00000504046 698 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF4O95639 AC112198.4-201ENST00000515450 351 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 RNU1-61P-201ENST00000516107 151 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 SNORD59.2-201ENST00000516873 68 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 MTND1P36-201ENST00000522384 936 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AP001317.1-201ENST00000531194 960 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.14□□□□□ -2.07
CPSF4O95639 AC087481.2-201ENST00000565492 330 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC122134.1-202ENST00000569111 1201 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC090666.1-201ENST00000578241 445 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 VN1R87P-201ENST00000596706 487 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 DUXAP3-201ENST00000603616 594 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AP003973.1-201ENST00000604639 691 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC099785.1-201ENST00000605697 437 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC006329.2-201ENST00000611491 394 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AC040168.1-201ENST00000623594 991 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 AL512506.2-201ENST00000624472 458 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF4O95639 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CPSF4O95639 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF4O95639 Z99496.1-201ENST00000469424 1477 ntBASIC2.14□□□□□ -2.07
CPSF4O95639 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CPSF4O95639 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CPSF4O95639 AL591416.1-201ENST00000404015 867 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC009963.1-201ENST00000417265 157 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC092634.6-201ENST00000418558 192 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF4O95639 RAC1P8-201ENST00000427086 527 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.13□□□□□ -2.07
CPSF4O95639 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF4O95639 RPL23AP83-201ENST00000434984 473 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC241584.1-201ENST00000438469 1241 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 RABEPKP1-201ENST00000440529 1026 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF4O95639 VPS26AP1-201ENST00000483197 979 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC104435.1-201ENST00000483483 166 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.13□□□□□ -2.07
CPSF4O95639 AC093767.1-201ENST00000504523 156 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.13□□□□□ -2.07
CPSF4O95639 AC087894.1-201ENST00000538359 518 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.13□□□□□ -2.07
CPSF4O95639 SULT1C2P1-202ENST00000562418 459 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 AC012182.1-201ENST00000570133 895 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 MIR5007-201ENST00000583098 95 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 SNORD84-203ENST00000584275 78 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.13□□□□□ -2.07
CPSF4O95639 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 BDH2P1-201ENST00000602288 736 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC128687.1-201ENST00000605304 619 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 VIS1.1-201ENST00000610517 203 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC018755.4-201ENST00000619715 454 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC007998.5-201ENST00000622938 237 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.13□□□□□ -2.07
CPSF4O95639 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CPSF4O95639 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CPSF4O95639 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.13□□□□□ -2.07
CPSF4O95639 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CPSF4O95639 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CPSF4O95639 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.12□□□□□ -2.07
CPSF4O95639 DBF4P1-201ENST00000412976 1892 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CPSF4O95639 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 RNU6-657P-201ENST00000383904 107 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 SNORA51.6-201ENST00000384151 125 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AL024474.1-201ENST00000404655 591 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 BTF3P8-201ENST00000414577 526 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC107081.1-201ENST00000414975 361 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.12□□□□□ -2.07
CPSF4O95639 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC018634.1-201ENST00000437554 401 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 ARF4P4-201ENST00000439608 520 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.12□□□□□ -2.07
CPSF4O95639 AC016550.1-201ENST00000505348 785 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 AC004062.1-201ENST00000509926 645 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 RNA5SP468-201ENST00000516782 93 ntBASIC2.12□□□□□ -2.07
CPSF4O95639 SNORA48.10-201ENST00000516965 160 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms