Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC103988.1-201ENST00000566382 2177 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN9O95484 DEFB108F-201ENST00000344638 222 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 RNU4-51P-201ENST00000364206 140 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 RNU6-851P-201ENST00000384565 107 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 SNORA40.2-201ENST00000390847 128 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC022018.1-201ENST00000430685 241 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AC092573.2-201ENST00000434546 243 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 SETP8-201ENST00000435341 628 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 SDCBPP1-201ENST00000440192 890 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN9O95484 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC006445.2-201ENST00000510061 472 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AL359273.1-201ENST00000510918 627 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 RNU6-276P-201ENST00000516114 96 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN9O95484 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.79□□□□□ -1.96
CLDN9O95484 DEFB108D-201ENST00000527787 222 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AC118942.1-201ENST00000529674 1035 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AP000867.2-201ENST00000532468 320 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC069304.2-201ENST00000605154 435 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLDN9O95484 OR1S1-201ENST00000624470 978 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 AP000720.1-201ENST00000625091 483 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN9O95484 AC000403.1-201ENST00000613696 3585 ntBASIC2.79□□□□□ -1.96
CLDN9O95484 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLDN9O95484 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN9O95484 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN9O95484 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN9O95484 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN9O95484 AL356473.1-201ENST00000406203 1408 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN9O95484 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN9O95484 AC008568.2-201ENST00000623862 2313 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN9O95484 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLDN9O95484 SNORA48.5-201ENST00000391143 135 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AL031679.1-201ENST00000400616 525 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC068533.2-201ENST00000411872 306 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC093151.1-201ENST00000427711 313 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 GAPDHP27-201ENST00000447427 1020 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC234775.1-201ENST00000454247 670 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AP001486.1-201ENST00000463339 476 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC113347.3-201ENST00000509113 148 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC017037.2-201ENST00000513850 890 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC093677.1-201ENST00000514414 678 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN9O95484 AC007536.1-201ENST00000533382 349 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN9O95484 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN9O95484 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN9O95484 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN9O95484 AL157394.1-201ENST00000562983 1224 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 MTND3P13-201ENST00000574391 343 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC006504.3-201ENST00000586818 523 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC105224.1-201ENST00000587055 421 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN9O95484 AC090772.4-201ENST00000623599 362 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN9O95484 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN9O95484 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CLDN9O95484 AC012321.1-201ENST00000561622 1588 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
CLDN9O95484 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CLDN9O95484 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.78□□□□□ -1.97
CLDN9O95484 GABRG2-229ENST00000641017 3628 ntBASIC2.78□□□□□ -1.97
CLDN9O95484 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLDN9O95484 RNU6-28P-201ENST00000362378 107 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN9O95484 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 MTATP6P19-201ENST00000413797 659 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 CCDC58P2-201ENST00000417131 366 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN9O95484 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN9O95484 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN9O95484 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.77□□□□□ -1.97
CLDN9O95484 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLDN9O95484 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN9O95484 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN9O95484 RPL37P4-201ENST00000448908 268 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 AC083906.5-201ENST00000503722 328 ntBASIC2.77□□□□□ -1.97
CLDN9O95484 AC022483.1-201ENST00000514020 567 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms