Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MTND5P13-201ENST00000513046 1079 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX4O60224 SNORA31.8-201ENST00000516327 108 ntBASIC3.38□□□□□ -1.87
SSX4O60224 RNA5SP179-201ENST00000517284 121 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AP002748.2-201ENST00000528671 348 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AP000907.2-201ENST00000530827 353 ntBASIC3.38□□□□□ -1.87
SSX4O60224 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.38□□□□□ -1.87
SSX4O60224 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX4O60224 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
SSX4O60224 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
SSX4O60224 ZNF519P3-201ENST00000557158 1032 ntBASIC3.38□□□□□ -1.87
SSX4O60224 MED28P6-201ENST00000558776 231 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.38□□□□□ -1.87
SSX4O60224 AP001981.2-201ENST00000603241 418 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AL358072.1-201ENST00000604156 575 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC091167.4-201ENST00000605079 184 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC135507.1-201ENST00000607214 561 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AL355472.4-201ENST00000610233 626 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AC093783.1-201ENST00000612976 329 ntBASIC3.38□□□□□ -1.87
SSX4O60224 AL158063.1-201ENST00000615349 536 ntBASIC3.38□□□□□ -1.87
SSX4O60224 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SSX4O60224 AC048344.4-201ENST00000619744 527 ntBASIC3.38□□□□□ -1.87
SSX4O60224 FP236240.3-201ENST00000623061 327 ntBASIC3.38□□□□□ -1.87
SSX4O60224 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.38□□□□□ -1.87
SSX4O60224 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
SSX4O60224 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SSX4O60224 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SSX4O60224 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.38□□□□□ -1.87
SSX4O60224 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX4O60224 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 RNU5E-8P-201ENST00000363502 116 ntBASIC3.37□□□□□ -1.87
SSX4O60224 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
SSX4O60224 MIR7-3-201ENST00000384898 110 ntBASIC3.37□□□□□ -1.87
SSX4O60224 RPL7P25-201ENST00000404151 721 ntBASIC3.37□□□□□ -1.87
SSX4O60224 SNORA11.1-201ENST00000408133 129 ntBASIC3.37□□□□□ -1.87
SSX4O60224 RNA5SP129-201ENST00000410276 118 ntBASIC3.37□□□□□ -1.87
SSX4O60224 RNA5SP44-201ENST00000410446 133 ntBASIC3.37□□□□□ -1.87
SSX4O60224 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
SSX4O60224 SEPT2P1-201ENST00000419651 180 ntBASIC3.37□□□□□ -1.87
SSX4O60224 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.37□□□□□ -1.87
SSX4O60224 MTATP6P4-201ENST00000427725 675 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.37□□□□□ -1.87
SSX4O60224 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 AC083863.1-201ENST00000438811 231 ntBASIC3.37□□□□□ -1.87
SSX4O60224 HMGB1P37-201ENST00000439613 609 ntBASIC3.37□□□□□ -1.87
SSX4O60224 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
SSX4O60224 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 RPL7P49-201ENST00000471402 708 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 AC112204.1-201ENST00000502591 103 ntBASIC3.37□□□□□ -1.87
SSX4O60224 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 VN1R104P-201ENST00000505115 1009 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC105313.1-201ENST00000509121 353 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC091965.2-201ENST00000512324 613 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSX4O60224 FABP5P5-201ENST00000515537 406 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.37□□□□□ -1.87
SSX4O60224 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SSX4O60224 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 AC011602.1-201ENST00000546484 331 ntBASIC3.37□□□□□ -1.87
SSX4O60224 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.37□□□□□ -1.87
SSX4O60224 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.37□□□□□ -1.87
SSX4O60224 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
SSX4O60224 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 AC068790.3-201ENST00000602988 553 ntBASIC3.37□□□□□ -1.87
SSX4O60224 AC068276.1-201ENST00000605793 379 ntBASIC3.37□□□□□ -1.87
SSX4O60224 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 AC095031.1-201ENST00000623685 672 ntBASIC3.37□□□□□ -1.87
SSX4O60224 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SSX4O60224 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX4O60224 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SSX4O60224 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SSX4O60224 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
SSX4O60224 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SSX4O60224 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSX4O60224 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX4O60224 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SSX4O60224 Y_RNA.77-201ENST00000362962 107 ntBASIC3.36□□□□□ -1.87
SSX4O60224 RNY3P10-201ENST00000384764 102 ntBASIC3.36□□□□□ -1.87
SSX4O60224 MIR19A-201ENST00000384878 82 ntBASIC3.36□□□□□ -1.87
SSX4O60224 MIR1251-201ENST00000408552 70 ntBASIC3.36□□□□□ -1.87
SSX4O60224 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX4O60224 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.36□□□□□ -1.87
SSX4O60224 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.36□□□□□ -1.87
SSX4O60224 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.36□□□□□ -1.87
SSX4O60224 MTND1P28-201ENST00000435623 950 ntBASIC3.36□□□□□ -1.87
SSX4O60224 MTND4P32-201ENST00000437189 1237 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms