Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
SGCEO43556 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SGCEO43556 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.34□□□□□ -2.03
SGCEO43556 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
SGCEO43556 RNU1-112P-201ENST00000364401 164 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AP002784.2-201ENST00000397300 549 ntBASIC2.34□□□□□ -2.03
SGCEO43556 NPM1P10-201ENST00000398310 865 ntBASIC2.34□□□□□ -2.03
SGCEO43556 UBE2V1P15-201ENST00000407776 448 ntBASIC2.34□□□□□ -2.03
SGCEO43556 RNU4-27P-201ENST00000410889 139 ntBASIC2.34□□□□□ -2.03
SGCEO43556 Z82209.1-201ENST00000422141 2135 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC009414.1-201ENST00000427200 443 ntBASIC2.34□□□□□ -2.03
SGCEO43556 PSMA6P3-201ENST00000428242 164 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AL356867.1-201ENST00000429623 299 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AL512637.2-201ENST00000431287 1256 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.34□□□□□ -2.03
SGCEO43556 RPL23AP83-201ENST00000434984 473 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.34□□□□□ -2.03
SGCEO43556 AC105272.1-201ENST00000438604 198 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC087588.1-201ENST00000462203 316 ntBASIC2.34□□□□□ -2.03
SGCEO43556 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.34□□□□□ -2.03
SGCEO43556 COX7A2P2-201ENST00000505291 250 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.34□□□□□ -2.03
SGCEO43556 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.34□□□□□ -2.03
SGCEO43556 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SGCEO43556 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.34□□□□□ -2.03
SGCEO43556 AC010546.1-201ENST00000569391 485 ntBASIC2.34□□□□□ -2.03
SGCEO43556 ZNF92P2-201ENST00000600543 1059 ntBASIC2.34□□□□□ -2.03
SGCEO43556 NRBF2P5-201ENST00000603087 788 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.34□□□□□ -2.03
SGCEO43556 AP002906.1-201ENST00000603405 233 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AL160237.3-201ENST00000604114 1013 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC005000.2-201ENST00000605468 310 ntBASIC2.34□□□□□ -2.03
SGCEO43556 TUG1_1.1-201ENST00000610654 145 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC034102.8-201ENST00000615146 484 ntBASIC2.34□□□□□ -2.03
SGCEO43556 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
SGCEO43556 AC090772.4-201ENST00000623599 362 ntBASIC2.34□□□□□ -2.03
SGCEO43556 ZNF849P-201ENST00000594711 1566 ntBASIC2.34□□□□□ -2.03
SGCEO43556 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SGCEO43556 PABPC1P9-201ENST00000426076 1612 ntBASIC2.33□□□□□ -2.04
SGCEO43556 RNU6-839P-201ENST00000363347 108 ntBASIC2.33□□□□□ -2.04
SGCEO43556 RNU6-549P-201ENST00000384433 107 ntBASIC2.33□□□□□ -2.04
SGCEO43556 MIR9-1-201ENST00000385198 89 ntBASIC2.33□□□□□ -2.04
SGCEO43556 MIR767-201ENST00000390228 109 ntBASIC2.33□□□□□ -2.04
SGCEO43556 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SGCEO43556 RPS4XP7-201ENST00000406274 780 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC096664.2-201ENST00000411843 406 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.33□□□□□ -2.04
SGCEO43556 SFR1P2-201ENST00000421841 730 ntBASIC2.33□□□□□ -2.04
SGCEO43556 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.33□□□□□ -2.04
SGCEO43556 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.33□□□□□ -2.04
SGCEO43556 AL590383.1-201ENST00000428602 75 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.33□□□□□ -2.04
SGCEO43556 RPS15AP7-201ENST00000439294 405 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC107083.1-201ENST00000439643 279 ntBASIC2.33□□□□□ -2.04
SGCEO43556 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.33□□□□□ -2.04
SGCEO43556 AC009237.8-201ENST00000445492 379 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.33□□□□□ -2.04
SGCEO43556 ST13P20-201ENST00000447996 1065 ntBASIC2.33□□□□□ -2.04
SGCEO43556 RNU7-23P-201ENST00000459465 62 ntBASIC2.33□□□□□ -2.04
SGCEO43556 RPS3AP14-201ENST00000483907 780 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.33□□□□□ -2.04
SGCEO43556 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SGCEO43556 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.33□□□□□ -2.04
SGCEO43556 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SGCEO43556 AC079600.2-201ENST00000550076 130 ntBASIC2.33□□□□□ -2.04
SGCEO43556 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.33□□□□□ -2.04
SGCEO43556 MTCYBP27-201ENST00000555160 670 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC090888.1-201ENST00000561335 1141 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.33□□□□□ -2.04
SGCEO43556 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.33□□□□□ -2.04
SGCEO43556 ELOCP29-201ENST00000588193 334 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
SGCEO43556 AC060766.3-201ENST00000591442 263 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.33□□□□□ -2.04
SGCEO43556 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.33□□□□□ -2.04
SGCEO43556 SDAD1P2-201ENST00000441308 2028 ntBASIC2.33□□□□□ -2.04
SGCEO43556 CR848007.1-201ENST00000442354 1699 ntBASIC2.33□□□□□ -2.04
SGCEO43556 AC109315.1-201ENST00000584143 1347 ntBASIC2.33□□□□□ -2.04
SGCEO43556 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SGCEO43556 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.32□□□□□ -2.04
SGCEO43556 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SGCEO43556 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SGCEO43556 MIR16-2-201ENST00000362117 81 ntBASIC2.32□□□□□ -2.04
SGCEO43556 RNU6-792P-201ENST00000363490 107 ntBASIC2.32□□□□□ -2.04
SGCEO43556 SNORA67.1-201ENST00000364749 141 ntBASIC2.32□□□□□ -2.04
SGCEO43556 RNU6-7-201ENST00000364784 107 ntBASIC2.32□□□□□ -2.04
SGCEO43556 RNU6-8-201ENST00000365467 107 ntBASIC2.32□□□□□ -2.04
SGCEO43556 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.32□□□□□ -2.04
SGCEO43556 RNU6-481P-201ENST00000384194 107 ntBASIC2.32□□□□□ -2.04
SGCEO43556 RNU6-1035P-201ENST00000384477 107 ntBASIC2.32□□□□□ -2.04
SGCEO43556 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
SGCEO43556 MIR135A2-201ENST00000384854 100 ntBASIC2.32□□□□□ -2.04
SGCEO43556 MIR483-201ENST00000385070 76 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AL133264.1-201ENST00000407157 562 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AL136133.1-201ENST00000413694 376 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AL358075.3-201ENST00000426289 226 ntBASIC2.32□□□□□ -2.04
SGCEO43556 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.32□□□□□ -2.04
SGCEO43556 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.32□□□□□ -2.04
SGCEO43556 OR4K11P-201ENST00000431829 904 ntBASIC2.32□□□□□ -2.04
SGCEO43556 RPL23AP74-201ENST00000437246 471 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms