Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 AC010546.1-201ENST00000569391 485 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 MIR3913-1-201ENST00000577744 102 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 MIR3118-1-201ENST00000581787 76 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.45□□□□□ -1.7
PRPF3O43395 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.45□□□□□ -1.7
PRPF3O43395 AC068790.6-201ENST00000602558 258 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF3O43395 TUG1_2.1-201ENST00000614234 87 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 AC099842.1-201ENST00000619919 596 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 FP236240.3-201ENST00000623061 327 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF3O43395 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 AC092447.7-201ENST00000422212 1621 ntBASIC4.45□□□□□ -1.7
PRPF3O43395 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF3O43395 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF3O43395 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF3O43395 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF3O43395 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
PRPF3O43395 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF3O43395 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
PRPF3O43395 U8.3-201ENST00000363321 132 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 Y_RNA.505-201ENST00000384489 102 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 Y_RNA.517-201ENST00000384551 106 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 CCNG1P1-201ENST00000406783 885 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 TOMM22P1-201ENST00000418578 312 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AL589872.1-201ENST00000426602 288 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF3O43395 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF3O43395 AC024082.2-201ENST00000434771 238 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AL138799.3-201ENST00000438968 350 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF3O43395 AL500522.2-201ENST00000448562 343 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF3O43395 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF3O43395 VN1R17P-201ENST00000472048 1090 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC084198.1-201ENST00000477747 402 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 TMED11P-201ENST00000479478 690 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 RN7SL323P-201ENST00000494712 295 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 RNU2-10P-201ENST00000516375 211 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 RNU2-46P-201ENST00000517038 113 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 ERHP1-201ENST00000523006 310 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 IGKV2D-19-201ENST00000523346 262 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF3O43395 AP003033.1-201ENST00000527244 415 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF3O43395 AL391156.1-201ENST00000554965 554 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF3O43395 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.44□□□□□ -1.7
PRPF3O43395 AC007687.1-201ENST00000602704 304 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC013476.2-201ENST00000614456 459 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AL354798.1-201ENST00000622505 329 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC091953.2-201ENST00000623979 160 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF3O43395 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
PRPF3O43395 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PRPF3O43395 AL133383.2-201ENST00000622958 2336 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF3O43395 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.44□□□□□ -1.7
PRPF3O43395 AC024560.2-201ENST00000507981 1497 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF3O43395 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
PRPF3O43395 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF3O43395 RNU6-50P-201ENST00000362356 103 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 Y_RNA.126-201ENST00000363382 111 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 RNU5E-8P-201ENST00000363502 116 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 RN7SKP280-201ENST00000364196 304 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 RNY4P34-201ENST00000364779 95 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PRPF3O43395 RPL7P60-201ENST00000397636 735 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 HLFP1-201ENST00000402375 499 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 MIR1193-201ENST00000408109 78 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF3O43395 USP12PX-201ENST00000432383 1057 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 HMGB1P12-201ENST00000438594 598 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 SNORA71B-202ENST00000439232 272 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AL031667.1-201ENST00000440222 725 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 MTCO3P45-201ENST00000443036 613 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AL359073.1-201ENST00000448036 403 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF3O43395 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF3O43395 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF3O43395 AC091153.1-201ENST00000466297 402 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PRPF3O43395 DUXAP2-201ENST00000519198 589 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF3O43395 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF3O43395 CYCSP30-201ENST00000546447 172 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF3O43395 MIR3690-201ENST00000580266 75 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.43□□□□□ -1.7
PRPF3O43395 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.43□□□□□ -1.7
PRPF3O43395 VN1R85P-201ENST00000601587 426 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AP002826.1-201ENST00000608835 315 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 Z99129.1-201ENST00000612510 255 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AC091834.1-201ENST00000614543 472 ntBASIC4.43□□□□□ -1.7
PRPF3O43395 AC079684.1-201ENST00000621405 437 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms