Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TO15178 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.41□□□□□ -1.86
TO15178 AC007389.2-201ENST00000434630 306 ntBASIC3.41□□□□□ -1.86
TO15178 TXNP1-201ENST00000441872 371 ntBASIC3.41□□□□□ -1.86
TO15178 AL359073.1-201ENST00000448036 403 ntBASIC3.41□□□□□ -1.86
TO15178 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.41□□□□□ -1.86
TO15178 AC073387.1-201ENST00000453261 709 ntBASIC3.41□□□□□ -1.86
TO15178 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.41□□□□□ -1.86
TO15178 SNRPGP9-201ENST00000456025 225 ntBASIC3.41□□□□□ -1.86
TO15178 SNRPFP4-201ENST00000456366 242 ntBASIC3.41□□□□□ -1.86
TO15178 AC004801.2-202ENST00000463559 283 ntBASIC3.41□□□□□ -1.86
TO15178 AL672167.3-201ENST00000465951 960 ntBASIC3.41□□□□□ -1.86
TO15178 AC080014.1-201ENST00000496877 1201 ntBASIC3.41□□□□□ -1.86
TO15178 AC022483.1-201ENST00000514020 567 ntBASIC3.41□□□□□ -1.86
TO15178 MTND4LP31-201ENST00000514859 294 ntBASIC3.41□□□□□ -1.86
TO15178 RNU6-711P-201ENST00000517255 106 ntBASIC3.41□□□□□ -1.86
TO15178 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.41□□□□□ -1.86
TO15178 HMGN1P28-201ENST00000521340 364 ntBASIC3.41□□□□□ -1.86
TO15178 IGHV3-76-201ENST00000522465 295 ntBASIC3.41□□□□□ -1.86
TO15178 AC007991.1-201ENST00000522680 631 ntBASIC3.41□□□□□ -1.86
TO15178 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.41□□□□□ -1.86
TO15178 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.41□□□□□ -1.86
TO15178 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.41□□□□□ -1.86
TO15178 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.41□□□□□ -1.86
TO15178 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.41□□□□□ -1.86
TO15178 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.41□□□□□ -1.86
TO15178 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.41□□□□□ -1.86
TO15178 AP001429.1-201ENST00000602568 530 ntBASIC3.41□□□□□ -1.86
TO15178 AC068276.1-201ENST00000605793 379 ntBASIC3.41□□□□□ -1.86
TO15178 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.41□□□□□ -1.86
TO15178 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.41□□□□□ -1.86
TO15178 AC093783.1-201ENST00000612976 329 ntBASIC3.41□□□□□ -1.86
TO15178 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.41□□□□□ -1.86
TO15178 AL110115.1-201ENST00000614396 364 ntBASIC3.41□□□□□ -1.86
TO15178 AC009090.3-201ENST00000616553 565 ntBASIC3.41□□□□□ -1.86
TO15178 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.41□□□□□ -1.86
TO15178 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TO15178 AP003399.1-201ENST00000637534 361 ntBASIC3.41□□□□□ -1.86
TO15178 AC244258.1-201ENST00000637553 1071 ntBASIC3.41□□□□□ -1.86
TO15178 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
TO15178 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TO15178 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TO15178 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TO15178 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.41□□□□□ -1.86
TO15178 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TO15178 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
TO15178 AC118273.1-201ENST00000525324 3006 ntBASIC3.4□□□□□ -1.86
TO15178 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
TO15178 RNU6-533P-201ENST00000384144 107 ntBASIC3.4□□□□□ -1.87
TO15178 RNY3P10-201ENST00000384764 102 ntBASIC3.4□□□□□ -1.87
TO15178 AL590704.1-201ENST00000402856 794 ntBASIC3.4□□□□□ -1.87
TO15178 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.4□□□□□ -1.87
TO15178 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.4□□□□□ -1.87
TO15178 AC079780.1-201ENST00000428259 207 ntBASIC3.4□□□□□ -1.87
TO15178 OR4K11P-201ENST00000431829 904 ntBASIC3.4□□□□□ -1.87
TO15178 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.4□□□□□ -1.87
TO15178 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.4□□□□□ -1.87
TO15178 AC004866.2-201ENST00000438285 481 ntBASIC3.4□□□□□ -1.87
TO15178 RPL22P17-201ENST00000438729 315 ntBASIC3.4□□□□□ -1.87
TO15178 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.4□□□□□ -1.87
TO15178 RAC1P7-201ENST00000445367 377 ntBASIC3.4□□□□□ -1.87
TO15178 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.4□□□□□ -1.87
TO15178 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.4□□□□□ -1.87
TO15178 RNA5SP269-201ENST00000459032 137 ntBASIC3.4□□□□□ -1.87
TO15178 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TO15178 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.4□□□□□ -1.87
TO15178 RPL23AP41-201ENST00000484754 458 ntBASIC3.4□□□□□ -1.87
TO15178 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.4□□□□□ -1.87
TO15178 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.4□□□□□ -1.87
TO15178 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.4□□□□□ -1.87
TO15178 RANP9-201ENST00000519957 271 ntBASIC3.4□□□□□ -1.87
TO15178 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.4□□□□□ -1.87
TO15178 AC060788.1-201ENST00000521318 469 ntBASIC3.4□□□□□ -1.87
TO15178 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TO15178 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.4□□□□□ -1.87
TO15178 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.4□□□□□ -1.87
TO15178 MIR5697-201ENST00000578045 78 ntBASIC3.4□□□□□ -1.87
TO15178 AC006130.2-201ENST00000586202 326 ntBASIC3.4□□□□□ -1.87
TO15178 UBE2L4-201ENST00000587688 464 ntBASIC3.4□□□□□ -1.87
TO15178 AL020997.2-201ENST00000602607 184 ntBASIC3.4□□□□□ -1.87
TO15178 AC080013.6-201ENST00000606185 215 ntBASIC3.4□□□□□ -1.87
TO15178 AC135507.1-201ENST00000607214 561 ntBASIC3.4□□□□□ -1.87
TO15178 OR10AB1P-201ENST00000609613 938 ntBASIC3.4□□□□□ -1.87
TO15178 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.4□□□□□ -1.87
TO15178 AL158801.5-201ENST00000623123 465 ntBASIC3.4□□□□□ -1.87
TO15178 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.4□□□□□ -1.87
TO15178 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TO15178 TAB3P1-202ENST00000452645 1634 ntBASIC3.4□□□□□ -1.87
TO15178 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
TO15178 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TO15178 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TO15178 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TO15178 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TO15178 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TO15178 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TO15178 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.39□□□□□ -1.87
TO15178 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.39□□□□□ -1.87
TO15178 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
TO15178 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
TO15178 RPL7P60-201ENST00000397636 735 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms