Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC244453.4-201ENST00000419150 388 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 ARL2BPP3-201ENST00000421226 480 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 TMEM167AP1-201ENST00000423409 219 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 MTND4P24-201ENST00000424002 397 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC234781.2-201ENST00000426370 994 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AL365496.1-201ENST00000426885 215 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AL035410.1-201ENST00000427409 427 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 UBE2V2P3-201ENST00000433562 437 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AL590762.3-201ENST00000436372 640 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 SNRPGP6-201ENST00000451124 220 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 RPS20P24-201ENST00000457473 361 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC008413.1-201ENST00000511864 177 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 RNA5SP320-201ENST00000516263 124 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 EEF1B2P4-201ENST00000551398 348 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 OR11H5P-201ENST00000554039 926 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 ATP5F1P7-201ENST00000567330 760 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 MIR3609-201ENST00000582661 80 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC011471.1-201ENST00000585766 187 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 BNIP3P4-201ENST00000604946 565 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC055876.5-201ENST00000605667 259 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC103810.6-201ENST00000606708 136 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC092954.1-201ENST00000609121 445 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 ATP5A1P2-202ENST00000616464 443 ntBASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV1-1A0A0B4J248 AC007342.9-201ENST00000623877 1385 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AC008669.1-201ENST00000565823 2178 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 ANKRD36P1-201ENST00000344424 659 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 MIR518C-201ENST00000384822 101 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AL009174.1-201ENST00000426577 416 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 MYL8P-204ENST00000431574 518 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 NDUFB4P6-201ENST00000436819 366 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AC018634.1-201ENST00000437554 401 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 PGBD4P3-201ENST00000440731 581 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 RPL23AP23-201ENST00000452590 471 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AC108734.3-201ENST00000481241 1165 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AC104108.1-201ENST00000509930 412 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AP000867.2-201ENST00000532468 320 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 OR4K7P-201ENST00000580232 945 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AP001033.2-201ENST00000609701 1003 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 uc_338.20-201ENST00000621563 178 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 AL590396.2-201ENST00000636511 1041 ntBASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV1-1A0A0B4J248 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC008432.1-201ENST00000615912 1320 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 RNA5SP68-201ENST00000363885 119 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 SNORA44-201ENST00000384584 132 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 SUMO2P12-201ENST00000405924 140 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 RNU6-77P-201ENST00000410554 91 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC005005.2-201ENST00000420779 380 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 MTND4LP10-201ENST00000435146 291 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC004866.2-201ENST00000438285 481 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC107083.1-201ENST00000439643 279 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AL121871.1-201ENST00000443413 436 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AL591719.1-201ENST00000444669 744 ntBASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.73□□□□□ -2.13
TRAV1-1A0A0B4J248 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms