Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 Y_RNA.296-201ENST00000364930 108 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU1-39P-201ENST00000383897 165 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR1193-201ENST00000408109 78 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR2116-201ENST00000517221 80 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC022616.3-201ENST00000523940 148 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 MTCYBP20-201ENST00000524239 1129 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC063950.1-201ENST00000552036 308 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC245505.1-201ENST00000556398 224 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AL845331.3-202ENST00000562856 261 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC010546.1-201ENST00000569391 485 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 ZNF415P1-201ENST00000582279 1166 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 AC073534.2-201ENST00000620377 381 ntBASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.66□□□□□ -1.66
COL4A3BPQ9Y5P4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
COL4A3BPQ9Y5P4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 PPIAP31-201ENST00000405422 495 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 RN7SKP263-201ENST00000411194 309 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 RN7SL432P-201ENST00000484057 298 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 MTND2P33-201ENST00000506452 1031 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR3167-201ENST00000579623 85 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC064801.1-201ENST00000612025 407 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC136475.10-201ENST00000620253 385 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.65□□□□□ -1.67
COL4A3BPQ9Y5P4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RNA5SP388-201ENST00000362584 119 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR3074-201ENST00000384885 81 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RAC1P6-201ENST00000423911 575 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC079448.1-201ENST00000449377 373 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC006480.1-201ENST00000449887 378 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RNA5SP246-201ENST00000458909 119 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RN7SL585P-201ENST00000470538 280 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RPS23P3-201ENST00000470993 430 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AF213884.1-201ENST00000488102 463 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC017037.1-201ENST00000508460 471 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC091133.4-201ENST00000511142 308 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms