Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AP003102.1-201ENST00000525638 661 ntBASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 AC004486.1-201ENST00000546846 233 ntBASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 MIR8084-201ENST00000614105 89 ntBASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.22□□□□□ -1.89
CTNNA3Q9UI47 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CTNNA3Q9UI47 AC138915.1-201ENST00000565427 1685 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AL672167.1-206ENST00000356293 943 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 MIR16-2-201ENST00000362117 81 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AP002784.2-201ENST00000397300 549 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 RSL24D1P4-201ENST00000400938 484 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 FO393413.1-201ENST00000402892 195 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AL512661.1-201ENST00000434586 1253 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC234064.1-201ENST00000436312 247 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AL096803.2-201ENST00000450032 677 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AP000705.1-201ENST00000454567 350 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 CDC42P1-201ENST00000456658 548 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 YWHAEP4-201ENST00000505390 198 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 RN7SKP132-201ENST00000516001 208 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 SNORA70.16-201ENST00000516390 95 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 OR7K1P-201ENST00000546439 926 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC079148.1-201ENST00000565944 819 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC079089.3-201ENST00000603094 673 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AL022099.1-201ENST00000604551 712 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 AC073592.7-201ENST00000623659 507 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 ZNF849P-201ENST00000594711 1566 ntBASIC3.21□□□□□ -1.9
CTNNA3Q9UI47 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 SNORD51-201ENST00000384320 80 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 MIR196B-201ENST00000384852 84 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AL513477.1-202ENST00000417061 214 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 RPL27AP8-201ENST00000424277 446 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC005345.1-201ENST00000431868 217 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 COL6A4P2-205ENST00000509855 506 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC025881.1-201ENST00000518851 512 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 SETP2-201ENST00000553886 926 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 MIR3670-2-201ENST00000582974 65 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 MIR3670-1-201ENST00000584160 65 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 MIR3670-3-201ENST00000584855 65 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 VN1R90P-201ENST00000595717 726 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC133794.1-201ENST00000602731 914 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 MIR3670-4-201ENST00000612260 65 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AC093875.1-201ENST00000623688 504 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 AP000526.1-201ENST00000603308 1388 ntBASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTNNA3Q9UI47 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 SNORA51.6-201ENST00000384151 125 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 RNU6-481P-201ENST00000384194 107 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 RNU6-932P-201ENST00000391108 106 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 RPL7P30-201ENST00000420888 709 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 RPL31P54-201ENST00000429803 370 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AL513124.1-201ENST00000450410 614 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC010099.1-201ENST00000455434 375 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC008379.1-201ENST00000463655 464 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 UBL5P3-201ENST00000475112 231 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC118282.2-201ENST00000508739 374 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC091544.4-201ENST00000555268 342 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC090695.1-201ENST00000561269 1222 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC093519.1-201ENST00000566109 298 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 MTCO1P40-201ENST00000574371 625 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 MIR3609-201ENST00000582661 80 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC008739.2-201ENST00000597006 317 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC019159.1-201ENST00000605094 187 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AC004696.1-201ENST00000614345 607 ntBASIC3.19□□□□□ -1.9
CTNNA3Q9UI47 AL512283.1-201ENST00000606756 1384 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms