Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 TIMM9P2-201ENST00000419324 266 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 MTATP6P4-201ENST00000427725 675 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 MUPP-201ENST00000438111 566 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 ISCA1P2-201ENST00000438679 421 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 RABEPKP1-201ENST00000440529 1026 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 DUXAP8-207ENST00000456786 622 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 RPS23P3-201ENST00000470993 430 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 ST13P14-201ENST00000474095 734 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC023424.2-201ENST00000493479 777 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 MLLT10P2-201ENST00000506434 249 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 XKRY-201ENST00000510392 1100 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC022861.1-201ENST00000522981 663 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 SNRPGP16-201ENST00000533275 226 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC006504.3-201ENST00000586818 523 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC027449.1-201ENST00000608890 407 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 DUXAP10-204ENST00000612052 616 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AC109809.1-201ENST00000619665 545 ntBASIC3.25□□□□□ -1.89
HPS4Q9NQG7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS4Q9NQG7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC004972.1-201ENST00000623934 2209 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC097714.1-201ENST00000511272 1647 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 Y_RNA.192-201ENST00000363977 102 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 HMGB1P17-201ENST00000403495 628 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 MTATP6P27-201ENST00000416987 621 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 YPEL5P1-201ENST00000419731 367 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC012498.1-201ENST00000424037 437 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 ATP5F1P1-201ENST00000433775 569 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 MTND4P6-201ENST00000438297 472 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC092155.2-201ENST00000454675 477 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 TPT1P8-201ENST00000510120 555 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AL132857.1-201ENST00000555180 708 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 FAM60BP-201ENST00000578364 658 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 OR4K7P-201ENST00000580232 945 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 MTCO2P2-201ENST00000591258 225 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 VN1R78P-201ENST00000597393 564 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 PRELID3BP8-201ENST00000604148 295 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AP001330.4-201ENST00000604350 154 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 AC090772.4-201ENST00000623599 362 ntBASIC3.24□□□□□ -1.89
HPS4Q9NQG7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS4Q9NQG7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 OR1S2-201ENST00000302592 978 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 RNU4-92P-201ENST00000363783 136 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 Y_RNA.465-201ENST00000384293 102 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 RNU6-1242P-201ENST00000391052 103 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MTCO1P39-201ENST00000426148 480 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 OR2B8P-201ENST00000432841 938 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MTCYBP34-201ENST00000439552 670 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AL353691.1-201ENST00000451332 387 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MTCO3P11-201ENST00000455103 774 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC079395.1-201ENST00000510981 262 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC006499.2-201ENST00000513470 337 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 SNORA31.8-201ENST00000516327 108 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 RN7SKP282-201ENST00000516824 299 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC009812.2-201ENST00000517657 457 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms