Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC007390.1-201ENST00000415722 356 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC018644.1-201ENST00000429934 551 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 CKS1BP5-201ENST00000434172 273 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL357552.1-201ENST00000445254 415 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL592447.1-201ENST00000447592 540 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 RAB9AP1-201ENST00000449393 573 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 MTND1P27-201ENST00000451117 902 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC007967.1-201ENST00000455422 1159 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 SUMO2P2-201ENST00000456482 255 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 MTCYBP20-201ENST00000524239 1129 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AP003392.2-201ENST00000527269 208 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC034105.4-201ENST00000568304 277 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC005771.1-201ENST00000585581 349 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC006566.1-201ENST00000608943 513 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC008250.2-201ENST00000615261 205 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AL357559.1-201ENST00000622228 274 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 CR392039.5-201ENST00000623201 510 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AP003355.3-201ENST00000623465 114 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 AC040168.1-201ENST00000623594 991 ntBASIC3.65□□□□□ -1.83
PCDH9Q9HC56 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDH9Q9HC56 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL049780.3-201ENST00000624612 1583 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL161781.1-201ENST00000354277 403 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 MIR1250-201ENST00000408098 113 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 Y_RNA.598-201ENST00000410480 95 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RNU2-16P-201ENST00000410712 136 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RNU4-78P-201ENST00000410940 126 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RN7SKP53-201ENST00000411337 315 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 HMGN1P14-201ENST00000412459 517 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RPL21P32-201ENST00000419877 477 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL513174.1-201ENST00000423182 629 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC005517.2-201ENST00000424673 553 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC109583.1-201ENST00000432156 268 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RPS24P1-201ENST00000438550 371 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RPL22P17-201ENST00000438729 315 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL133547.1-201ENST00000448546 220 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 Z82190.1-201ENST00000454534 490 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL136097.1-201ENST00000456945 913 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RPL7P15-201ENST00000461190 712 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 FTH1P2-201ENST00000466086 412 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC146507.1-201ENST00000468335 354 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC023598.1-201ENST00000472521 361 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL049830.2-201ENST00000480072 201 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC010625.1-201ENST00000511296 403 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RN7SKP18-201ENST00000516005 275 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RNU6-27P-201ENST00000516146 107 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 PAICSP4-201ENST00000517543 1253 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 TRMT10BP1-201ENST00000519377 943 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 NDUFB9P3-201ENST00000521269 501 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 MED28P5-201ENST00000528254 438 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 OR8L1P-201ENST00000534005 955 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC011602.1-201ENST00000546484 331 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 CENPUP2-201ENST00000555897 1186 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 BNIP3P8-201ENST00000597863 560 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 Z99129.1-201ENST00000612510 255 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AC039056.2-201ENST00000622261 511 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 MTND5P3-201ENST00000438536 1800 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 AL161912.2-201ENST00000565707 3007 ntBASIC3.64□□□□□ -1.83
PCDH9Q9HC56 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PCDH9Q9HC56 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 AC007823.1-201ENST00000569932 1566 ntBASIC3.63□□□□□ -1.83
PCDH9Q9HC56 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDH9Q9HC56 MFSD8-233ENST00000641482 4860 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms