Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AL606662.1-201ENST00000445763 553 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC092754.2-201ENST00000463506 460 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AP001025.2-201ENST00000490908 477 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC112673.1-201ENST00000513168 575 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC034159.1-201ENST00000513885 583 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 SNORA64.4-201ENST00000516632 81 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 OR7K1P-201ENST00000546439 926 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.84□□□□□ -1.79
SDF4Q9BRK5 MIR4276-201ENST00000584832 70 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC021171.1-201ENST00000603137 706 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC106900.2-201ENST00000604994 317 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AL158211.4-201ENST00000606988 584 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC072039.2-201ENST00000608883 439 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AL450472.3-201ENST00000615578 367 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.79
SDF4Q9BRK5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.84□□□□□ -1.79
SDF4Q9BRK5 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SDF4Q9BRK5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
SDF4Q9BRK5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SDF4Q9BRK5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SDF4Q9BRK5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SDF4Q9BRK5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AL356274.2-201ENST00000624379 3752 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 U3.19-201ENST00000390893 196 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC245291.1-201ENST00000419501 328 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 RPL27AP8-201ENST00000424277 446 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC090774.1-201ENST00000435925 246 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 HMGB3P11-201ENST00000440127 604 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 RPS3AP12-201ENST00000443616 753 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 RPS27AP1-201ENST00000475545 471 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 HSPE1P23-201ENST00000509838 286 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 APOOP4-201ENST00000513530 597 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 SNORA70.16-201ENST00000516390 95 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC104027.1-201ENST00000521887 300 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC090888.2-201ENST00000559765 1144 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC002400.1-201ENST00000569310 726 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 MIR3921-201ENST00000577308 85 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 MIR5047-201ENST00000579212 100 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AP002826.1-201ENST00000608835 315 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 AC009464.1-201ENST00000615731 469 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 PLCE1P1-201ENST00000622094 305 ntBASIC3.83□□□□□ -1.8
SDF4Q9BRK5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
SDF4Q9BRK5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 RNU6-433P-201ENST00000363216 104 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 RNU6-1078P-201ENST00000364522 103 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 RNA5SP88-201ENST00000365560 109 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 RNU6-1200P-201ENST00000384162 107 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 RNA5SP120-201ENST00000410900 112 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 MTCO1P17-201ENST00000411522 491 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 TPMTP3-201ENST00000411928 735 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC005326.1-201ENST00000429197 123 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AL354941.1-201ENST00000438600 464 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AL117351.1-201ENST00000438864 766 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 RPL26P6-201ENST00000440913 438 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC112653.1-201ENST00000443851 386 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC112198.1-201ENST00000505369 1220 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 SNORA3.4-201ENST00000515969 96 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 FAM60DP-201ENST00000524174 632 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 SETP2-201ENST00000553886 926 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC034268.2-201ENST00000571784 482 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 COX6CP3-201ENST00000580869 223 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC105224.1-201ENST00000587055 421 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AL109653.1-201ENST00000603091 248 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AL607023.1-201ENST00000620045 248 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AF117829.1-206ENST00000621883 3802 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AL356596.1-201ENST00000624230 379 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 AC127502.3-201ENST00000636170 1206 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 Z83843.1-201ENST00000604070 3685 ntBASIC3.82□□□□□ -1.8
SDF4Q9BRK5 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms