Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL117351.1-201ENST00000438864 766 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.39□□□□□ -1.87
CDCA3Q99618 AP000873.1-201ENST00000463987 400 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 HMGB1P25-201ENST00000468402 607 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 SNRPGP3-201ENST00000469405 227 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.39□□□□□ -1.87
CDCA3Q99618 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.39□□□□□ -1.87
CDCA3Q99618 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.39□□□□□ -1.87
CDCA3Q99618 LTV1P1-201ENST00000510683 1237 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.39□□□□□ -1.87
CDCA3Q99618 AC107934.2-201ENST00000518653 310 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.39□□□□□ -1.87
CDCA3Q99618 EEF1B2P4-201ENST00000551398 348 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 MRPS36P5-201ENST00000551909 298 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.39□□□□□ -1.87
CDCA3Q99618 MIR2682-201ENST00000580305 110 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.39□□□□□ -1.87
CDCA3Q99618 CLIC4P2-201ENST00000601934 717 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 BBIP1P1-201ENST00000602999 279 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AL357094.1-201ENST00000603845 844 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AL390208.1-201ENST00000605885 644 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AC024560.3-201ENST00000608482 349 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AC008121.2-201ENST00000614647 523 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 ATP5A1P2-202ENST00000616464 443 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 XIST_intron.1-201ENST00000619444 68 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AC110801.1-201ENST00000623590 212 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.39□□□□□ -1.87
CDCA3Q99618 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 AC007671.2-201ENST00000637344 619 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDCA3Q99618 AF127577.6-201ENST00000623352 2191 ntBASIC3.39□□□□□ -1.87
CDCA3Q99618 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
CDCA3Q99618 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDCA3Q99618 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDCA3Q99618 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDCA3Q99618 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CDCA3Q99618 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDCA3Q99618 RPL21P132-201ENST00000331267 462 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 RNU6-28P-201ENST00000362378 107 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 RNU6-462P-201ENST00000362659 105 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 Y_RNA.169-201ENST00000363745 96 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 SNORA71.1-201ENST00000364523 117 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.38□□□□□ -1.87
CDCA3Q99618 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDCA3Q99618 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC083875.1-201ENST00000419509 405 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 MTND4P20-201ENST00000424125 869 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 UBE2D3P1-201ENST00000436669 444 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC002381.1-201ENST00000447049 280 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 OR6C5P-201ENST00000452388 923 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC092451.1-201ENST00000480211 153 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC078817.1-201ENST00000492623 435 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 COX7A2P2-201ENST00000505291 250 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC026801.2-201ENST00000515352 425 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.38□□□□□ -1.87
CDCA3Q99618 OR7K1P-201ENST00000546439 926 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC002400.1-201ENST00000569310 726 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
CDCA3Q99618 MIR3162-201ENST00000581818 82 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC010928.3-201ENST00000587712 541 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 SNRPGP15-201ENST00000600149 222 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AP000811.1-201ENST00000603803 651 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC025811.1-201ENST00000604312 472 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AC018714.1-201ENST00000605028 208 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 AL031667.3-201ENST00000620124 655 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC087359.1-201ENST00000508335 1740 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDCA3Q99618 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.38□□□□□ -1.87
CDCA3Q99618 AC138915.3-201ENST00000562908 1389 ntBASIC3.38□□□□□ -1.87
CDCA3Q99618 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDCA3Q99618 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDCA3Q99618 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDCA3Q99618 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDCA3Q99618 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDCA3Q99618 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CDCA3Q99618 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.37□□□□□ -1.87
CDCA3Q99618 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDCA3Q99618 Y_RNA.18-201ENST00000362461 102 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 RNU1-70P-201ENST00000362618 164 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 RNU6-777P-201ENST00000364265 104 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 RNU6-343P-201ENST00000364709 104 ntBASIC3.37□□□□□ -1.87
CDCA3Q99618 RNA5SP88-201ENST00000365560 109 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms