Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.81□□□□□ -1.96
IFT140Q96RY7 AC103810.1-201ENST00000579873 453 ntBASIC2.81□□□□□ -1.96
IFT140Q96RY7 AC002984.1-201ENST00000591692 448 ntBASIC2.81□□□□□ -1.96
IFT140Q96RY7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
IFT140Q96RY7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
IFT140Q96RY7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 PAICSP7-201ENST00000419829 962 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 UBE2V1P5-201ENST00000440070 405 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 CLIC4P1-201ENST00000453177 535 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 RPS15AP1-201ENST00000457423 391 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 AC021146.7-201ENST00000509604 775 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 AC113368.1-201ENST00000603736 382 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 AC138649.5-201ENST00000637456 137 ntBASIC2.8□□□□□ -1.96
IFT140Q96RY7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
IFT140Q96RY7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 RNU6-60P-201ENST00000364792 103 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 RNU6-603P-201ENST00000411403 107 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 TOMM22P1-201ENST00000418578 312 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 AC012181.1-201ENST00000479895 423 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.79□□□□□ -1.96
IFT140Q96RY7 AC024560.3-201ENST00000608482 349 ntBASIC2.79□□□□□ -1.96
IFT140Q96RY7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
IFT140Q96RY7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 SNORD114-26-201ENST00000363543 72 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 SNORA7.1-201ENST00000363750 139 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AP000567.1-201ENST00000406413 156 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 FNDC3CP-201ENST00000420795 1155 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 RPS4XP11-201ENST00000446897 772 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 RPL21P39-201ENST00000463605 483 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC011979.1-201ENST00000472300 483 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 RPL21P93-201ENST00000480465 489 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC233702.1-201ENST00000482905 502 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC093591.1-201ENST00000491435 481 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 SETP2-201ENST00000553886 926 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 YWHAQP7-201ENST00000603536 658 ntBASIC2.78□□□□□ -1.96
IFT140Q96RY7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
IFT140Q96RY7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
IFT140Q96RY7 RNU4-13P-201ENST00000364019 141 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 AL590664.1-201ENST00000448065 339 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AL161670.1-201ENST00000554348 137 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AC123786.2-201ENST00000603459 275 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 AC022709.1-201ENST00000615967 87 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 AL121594.5-201ENST00000631724 573 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
IFT140Q96RY7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 MTND4P23-201ENST00000447723 1363 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AC008568.2-201ENST00000623862 2313 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 SNORA16.1-201ENST00000364597 132 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 TAS2R15P-201ENST00000390674 928 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 MIR1323-201ENST00000408090 73 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 RNU6-174P-201ENST00000410406 106 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AL109741.2-201ENST00000455561 343 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AC073901.1-201ENST00000462471 408 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 ATP5EP1-201ENST00000510257 156 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
IFT140Q96RY7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 DUXAP3-201ENST00000603616 594 ntBASIC2.77□□□□□ -1.97
IFT140Q96RY7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.77□□□□□ -1.97
IFT140Q96RY7 ZNF876P-202ENST00000398732 1485 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
IFT140Q96RY7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.76□□□□□ -1.97
IFT140Q96RY7 ELOCP10-201ENST00000440624 327 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.76□□□□□ -1.97
IFT140Q96RY7 AC244505.5-201ENST00000443639 207 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 Z99714.1-201ENST00000450463 807 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 USP9YP10-201ENST00000454868 628 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 RNU6-717P-201ENST00000459076 104 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.76□□□□□ -1.97
IFT140Q96RY7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms