Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 RNU6-174P-201ENST00000410406 106 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 HMGB1P45-201ENST00000435986 653 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 XKRY2-201ENST00000442362 1093 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC096992.1-201ENST00000459808 709 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 DYNLL1P5-201ENST00000467158 270 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC092989.1-201ENST00000481235 277 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CFAP54Q96N23 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.63□□□□□ -2.15
CFAP54Q96N23 RMST_6.1-201ENST00000611980 203 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 STMN1P1-201ENST00000617809 440 ntBASIC1.63□□□□□ -2.15
CFAP54Q96N23 UBE2L2-201ENST00000254302 429 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 AC104435.1-201ENST00000483483 166 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 AC021382.1-201ENST00000483523 359 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.62□□□□□ -2.15
CFAP54Q96N23 AC103810.1-201ENST00000579873 453 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.62□□□□□ -2.15
CFAP54Q96N23 RNA5SP181-201ENST00000410246 98 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CFAP54Q96N23 HMGN1P8-201ENST00000463578 288 ntBASIC1.62□□□□□ -2.15
CFAP54Q96N23 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.62□□□□□ -2.15
CFAP54Q96N23 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CFAP54Q96N23 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 SNORA70.7-201ENST00000384159 133 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 AC008571.1-201ENST00000467232 300 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
CFAP54Q96N23 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CFAP54Q96N23 THAP5P1-201ENST00000439089 262 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 RPS27P5-201ENST00000444247 244 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.61□□□□□ -2.15
CFAP54Q96N23 AC008127.2-201ENST00000549925 1075 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 AC015720.1-201ENST00000565251 277 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 AL512283.1-201ENST00000606756 1384 ntBASIC1.61□□□□□ -2.15
CFAP54Q96N23 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CFAP54Q96N23 SNORA26.7-201ENST00000391288 122 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 RFC5P1-201ENST00000454419 874 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 SETP7-201ENST00000552169 453 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 RPS3AP23-202ENST00000574601 686 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 RPL21P2-201ENST00000440049 481 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 RPL23AP7-203ENST00000449021 469 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AP002345.1-201ENST00000456493 928 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 HMGB1P47-201ENST00000511281 589 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
CFAP54Q96N23 AC098679.5-201ENST00000624394 571 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 BTBD10P2-201ENST00000404779 676 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 RPPH1-2P-201ENST00000516688 293 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AC124283.4-201ENST00000581815 456 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AC060766.3-201ENST00000591442 263 ntBASIC1.6□□□□□ -2.15
CFAP54Q96N23 AL450326.2-201ENST00000421913 1962 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.59□□□□□ -2.15
CFAP54Q96N23 RPL39P40-201ENST00000445481 146 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 HMGN2P18-201ENST00000450680 270 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.59□□□□□ -2.15
CFAP54Q96N23 COX6CP14-201ENST00000469580 174 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.59□□□□□ -2.15
CFAP54Q96N23 COX6CP5-201ENST00000527162 228 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 MIR5000-201ENST00000577717 103 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 AC009314.1-201ENST00000603871 304 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 AC034102.8-201ENST00000615146 484 ntBASIC1.59□□□□□ -2.15
CFAP54Q96N23 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.59□□□□□ -2.15
CFAP54Q96N23 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CFAP54Q96N23 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CFAP54Q96N23 SNORD114-27-201ENST00000363766 70 ntBASIC1.59□□□□□ -2.16
CFAP54Q96N23 AC073310.1-201ENST00000423226 1033 ntBASIC1.59□□□□□ -2.16
CFAP54Q96N23 AC098934.3-201ENST00000430450 190 ntBASIC1.59□□□□□ -2.16
CFAP54Q96N23 AL590664.1-201ENST00000448065 339 ntBASIC1.59□□□□□ -2.16
CFAP54Q96N23 RPS3AP22-201ENST00000488297 769 ntBASIC1.59□□□□□ -2.16
CFAP54Q96N23 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.16
CFAP54Q96N23 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CFAP54Q96N23 Y_RNA.294-201ENST00000364916 102 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 EIF1AXP1-201ENST00000419267 435 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 MTCYBP12-201ENST00000440559 1134 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 ATG10-AS1-201ENST00000504846 648 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.58□□□□□ -2.16
CFAP54Q96N23 AC092159.4-201ENST00000624944 550 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AL512430.2-201ENST00000406786 339 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.58□□□□□ -2.16
CFAP54Q96N23 AL445213.1-201ENST00000412589 747 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 CR383656.8-201ENST00000549046 145 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.58□□□□□ -2.16
CFAP54Q96N23 FAM35CP-201ENST00000554755 2470 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CFAP54Q96N23 ZNF876P-202ENST00000398732 1485 ntBASIC1.58□□□□□ -2.16
CFAP54Q96N23 AC240504.1-201ENST00000395709 845 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms