Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AL121917.1-203ENST00000605534 577 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 VIS1.1-201ENST00000610517 203 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPG11Q96JI7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPG11Q96JI7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPG11Q96JI7 MIR193B-201ENST00000384907 83 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 RNU6-328P-201ENST00000390887 106 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 SEPT7P3-201ENST00000455017 621 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 AC092451.2-201ENST00000538746 658 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPG11Q96JI7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 PSMA6P4-201ENST00000603247 718 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 ZNF734P-201ENST00000419494 1534 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 RNU6-984P-201ENST00000363236 109 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 U3.40-201ENST00000408706 208 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 TOMM22P1-201ENST00000418578 312 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 BNIP3P2-201ENST00000441221 577 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
SPG11Q96JI7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.47□□□□□ -2.17
SPG11Q96JI7 AC090819.1-201ENST00000523800 1111 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.47□□□□□ -2.17
SPG11Q96JI7 RN7SL793P-201ENST00000583259 296 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.47□□□□□ -2.17
SPG11Q96JI7 AC007687.1-201ENST00000602704 304 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 MKKS-204ENST00000639674 192 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SPG11Q96JI7 DDX43P2-201ENST00000604753 1354 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SPG11Q96JI7 RNU6-716P-201ENST00000365621 103 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 MIR216A-201ENST00000385063 110 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 SETP10-201ENST00000424368 814 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 AC234781.2-201ENST00000426370 994 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 AMD1P1-201ENST00000457220 922 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 MTCYBP17-201ENST00000503579 789 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 RNA5SP121-201ENST00000516537 101 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.47□□□□□ -2.17
SPG11Q96JI7 STMN1P1-201ENST00000617809 440 ntBASIC1.47□□□□□ -2.17
SPG11Q96JI7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPG11Q96JI7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPG11Q96JI7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 XKRY2-201ENST00000442362 1093 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 USP9YP15-201ENST00000442391 422 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 MTND1P18-201ENST00000448191 573 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 CBX3P5-201ENST00000552017 521 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 AC245036.5-201ENST00000596330 847 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 Z82195.2-201ENST00000612348 18351 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 CKAP2P1-201ENST00000555477 2049 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 VTRNA1-3-201ENST00000365645 89 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 EBAG9P1-201ENST00000418955 543 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 MIR4448-201ENST00000584360 86 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 VN1R74P-201ENST00000613259 503 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 AC012150.2-201ENST00000621300 544 ntBASIC1.46□□□□□ -2.18
SPG11Q96JI7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SPG11Q96JI7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPG11Q96JI7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPG11Q96JI7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC025033.1-201ENST00000463883 194 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 GTF2IP9-201ENST00000502460 301 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 ABI1P1-201ENST00000603375 1120 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AL137847.3-201ENST00000611521 109 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 MTND5P7-201ENST00000413558 1798 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SPG11Q96JI7 RNU4-51P-201ENST00000364206 140 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 RNU6-198P-201ENST00000384258 104 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 U3.37-201ENST00000408528 213 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 FNDC3CP-201ENST00000420795 1155 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 RPS27P5-201ENST00000444247 244 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AL157827.1-201ENST00000447622 132 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AL583843.1-201ENST00000456070 346 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 RNA5SP402-201ENST00000517148 110 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC008126.1-201ENST00000549019 480 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC103987.3-201ENST00000582071 292 ntBASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.45□□□□□ -2.18
SPG11Q96JI7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SPG11Q96JI7 RNA5SP363-201ENST00000365072 115 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 AL445183.3-201ENST00000414168 502 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 XKRYP4-201ENST00000414395 483 ntBASIC1.44□□□□□ -2.18
SPG11Q96JI7 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms