Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC010186.2-204ENST00000537668 439 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC007954.1-201ENST00000554198 494 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 CYCSP2-201ENST00000558168 301 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 MIR4299-201ENST00000577899 72 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC068790.4-201ENST00000602474 263 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AL606834.2-201ENST00000602954 668 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC005034.5-201ENST00000604219 466 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC011374.2-201ENST00000607135 526 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC004775.1-201ENST00000607389 753 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC067747.1-201ENST00000608026 250 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC106052.1-201ENST00000608029 497 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AL450472.3-201ENST00000615578 367 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC005296.1-201ENST00000616145 209 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC073308.1-201ENST00000623696 305 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 OR1S1-201ENST00000624470 978 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 MIR7641-1-201ENST00000627518 61 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC012442.3-202ENST00000636742 206 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC069528.2-201ENST00000624849 1991 ntBASIC1.21□□□□□ -2.22
SPTSSBQ8NFR3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 RNA5SP68-201ENST00000363885 119 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AL359511.1-201ENST00000402970 211 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC099548.1-201ENST00000421443 426 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 PGBD4P6-201ENST00000421501 610 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AIMP1P2-201ENST00000425294 312 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC087499.2-201ENST00000432861 149 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC007389.2-201ENST00000434630 306 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC087884.1-201ENST00000469738 328 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 RPL31P60-201ENST00000478450 367 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 LINC00888-204ENST00000487386 421 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 CBX3P7-201ENST00000532876 502 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC022880.1-201ENST00000534017 973 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 MIR3921-201ENST00000577308 85 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 MIR4287-201ENST00000579398 78 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AL020997.2-201ENST00000602607 184 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 AC046144.1-201ENST00000478559 1853 ntBASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SPTSSBQ8NFR3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 ZNF658B-202ENST00000615961 3375 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 MIR21-201ENST00000362134 72 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 RNU6-673P-201ENST00000365084 104 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 MIR147B-201ENST00000390185 80 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AL138885.1-201ENST00000405921 675 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AL450338.1-201ENST00000407987 512 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 RPS20P15-201ENST00000412792 311 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 SNORD56-201ENST00000413522 71 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 HMGN2P19-201ENST00000425149 265 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC010881.1-201ENST00000433830 235 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 MTND4LP10-201ENST00000435146 291 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 RAB11AP1-201ENST00000442978 646 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC112653.1-201ENST00000443851 386 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC104978.1-201ENST00000449387 391 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC016724.1-201ENST00000453215 421 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 CDC42P1-201ENST00000456658 548 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 OR4G11P-201ENST00000492842 939 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 RN7SL504P-201ENST00000494496 287 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 SUMO2P6-201ENST00000505273 288 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC008885.1-201ENST00000514930 301 ntBASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC1.19□□□□□ -2.22
SPTSSBQ8NFR3 RNA5SP356-201ENST00000515972 94 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms