Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RN7SL853P-201ENST00000617250 223 ntBASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 AL158801.5-201ENST00000623123 465 ntBASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 AC091905.1-201ENST00000624400 311 ntBASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
SMC1BQ8NDV3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 SNORA20.2-201ENST00000383922 131 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 Y_RNA.453-201ENST00000384223 109 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MIR153-1-201ENST00000384914 90 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 SNORA3.3-201ENST00000408712 125 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 RN7SKP285-201ENST00000410137 318 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AL160275.2-201ENST00000412010 394 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC005517.2-201ENST00000424673 553 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC006548.1-201ENST00000427470 102 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 RPL23AP25-201ENST00000430973 463 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MTCO2P11-201ENST00000431069 680 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 TBCAP1-201ENST00000436520 327 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC132479.1-201ENST00000449160 144 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MTCO2P29-201ENST00000465212 189 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC019235.1-201ENST00000503847 207 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC116353.2-201ENST00000505332 712 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 RNU6-352P-201ENST00000516908 107 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC107934.1-201ENST00000522215 217 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 OR5AQ1P-201ENST00000527596 927 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 SETP7-201ENST00000552169 453 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 HMGB1P33-201ENST00000563485 527 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MIR3146-201ENST00000580367 79 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC006504.3-201ENST00000586818 523 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AL669831.4-202ENST00000590817 238 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC012507.3-201ENST00000603556 477 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AL139286.1-201ENST00000604465 483 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC002550.2-201ENST00000621246 394 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC012150.2-201ENST00000621300 544 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 CR381572.1-201ENST00000625098 102 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 MIR3688-2-201ENST00000636963 87 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 AC074029.4-201ENST00000624796 1859 ntBASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
SMC1BQ8NDV3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RNU6-181P-201ENST00000363225 107 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 Y_RNA.402-201ENST00000383972 102 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RNU6-114P-201ENST00000384704 105 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 Y_RNA.573-201ENST00000384763 105 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 CALM2P3-201ENST00000400429 449 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 HDGFP1-201ENST00000405943 252 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RNA5SP56-201ENST00000410277 118 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 HMGN1P24-201ENST00000412282 298 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RPS15AP12-201ENST00000419498 388 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 MTCYBP24-201ENST00000420387 1106 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC137499.1-201ENST00000427602 88 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RPL23AP33-201ENST00000442301 452 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 RPS4XP4-201ENST00000443195 763 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AL590399.6-201ENST00000446396 307 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 FGF7P3-201ENST00000454645 303 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC092989.1-201ENST00000481235 277 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC079382.1-201ENST00000493346 557 ntBASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.86□□□□□ -1.63
SMC1BQ8NDV3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms