Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC022483.1-201ENST00000514020 567 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 MIR3921-201ENST00000577308 85 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 SRGNP1-201ENST00000603392 451 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 DUXAP3-201ENST00000603616 594 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AL390208.1-201ENST00000605885 644 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC080013.3-201ENST00000606839 578 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 TUSC7.1-201ENST00000610969 165 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC004777.1-201ENST00000624317 287 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 SNORA50A-202ENST00000629536 136 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC011460.1-201ENST00000636268 1834 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 OR5BR1P-201ENST00000524992 1330 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.34□□□□□ -1.88
RTL3Q8N8U3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.88
RTL3Q8N8U3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RTL3Q8N8U3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC110774.1-201ENST00000623567 2018 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 U3.19-201ENST00000390893 196 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 MIR1290-201ENST00000408735 78 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 RNA5SP120-201ENST00000410900 112 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 RPS15AP6-201ENST00000420703 385 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 HSPE1P1-201ENST00000421494 318 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL451062.2-201ENST00000427515 271 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL008629.1-201ENST00000438615 184 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL591503.2-201ENST00000442314 1005 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 Z75741.1-201ENST00000446793 314 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 RPL21P134-201ENST00000453468 483 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 snoU13.8-201ENST00000458890 104 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC010468.1-201ENST00000461022 817 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 RPL21P8-201ENST00000465083 535 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL049714.1-201ENST00000466686 347 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 RPL32P34-201ENST00000486380 400 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL358832.1-201ENST00000497800 389 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC104090.1-201ENST00000506341 1171 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 RNU6-1129P-201ENST00000515964 104 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL512347.1-201ENST00000566420 503 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC011260.1-201ENST00000578420 472 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 MIR3944-201ENST00000581277 108 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC021171.1-201ENST00000603137 706 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC099778.2-201ENST00000610904 211 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AC104454.1-201ENST00000421341 1401 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AL390862.1-201ENST00000635467 1469 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 AP000776.1-201ENST00000530032 1663 ntBASIC3.33□□□□□ -1.88
RTL3Q8N8U3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 RNU6-621P-201ENST00000364752 109 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 SKINT1L-201ENST00000401057 817 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 MRPL50P2-201ENST00000416821 482 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL139421.1-201ENST00000423010 169 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 MTCYBP45-201ENST00000435243 565 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 ANKRD26P4-201ENST00000455755 950 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL359385.1-201ENST00000456509 365 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC097493.1-201ENST00000463958 372 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 MTND1P16-201ENST00000465177 898 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 RPL7P23-201ENST00000493874 747 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms