Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC123786.2-201ENST00000603459 275 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AL078603.1-201ENST00000603824 313 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC080078.3-201ENST00000605407 463 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC098592.2-201ENST00000413158 265 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 SEC63P1-201ENST00000425785 1258 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AL365400.1-201ENST00000431854 640 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 HMGB1P12-201ENST00000438594 598 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 MTND4LP16-201ENST00000440828 295 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 MTND3P6-201ENST00000485242 339 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 ATG10-AS1-201ENST00000504846 648 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 RNU2-58P-201ENST00000516403 183 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 MTND2P13-201ENST00000577438 1039 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC103987.3-201ENST00000582071 292 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 OR4G1P-201ENST00000588632 938 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC116447.1-201ENST00000613153 453 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AC034102.8-201ENST00000615146 484 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 MTCO1P4-201ENST00000520516 1409 ntBASIC1.2□□□□□ -2.22
CSMD3Q7Z407 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CSMD3Q7Z407 SNORA31-201ENST00000362607 130 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 HMGN2P19-201ENST00000425149 265 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC104564.1-201ENST00000493028 407 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AL356575.1-201ENST00000603008 283 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 BX649567.1-201ENST00000642071 1134 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AL355578.1-201ENST00000607405 1328 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 Y_RNA.30-201ENST00000362572 97 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AL035405.1-201ENST00000400795 710 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC093767.1-201ENST00000504523 156 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 GLYCAM1-201ENST00000546596 285 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC068714.1-201ENST00000559623 800 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC067838.1-201ENST00000606064 577 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC099778.2-201ENST00000610904 211 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC010678.1-201ENST00000614118 713 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AL138787.1-202ENST00000437804 898 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 SNORD108-201ENST00000459332 71 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 SNRPGP3-201ENST00000469405 227 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC092451.1-201ENST00000480211 153 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC104581.2-201ENST00000572227 430 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC124283.4-201ENST00000581815 456 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC245036.5-201ENST00000596330 847 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC019159.1-201ENST00000605094 187 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC243773.3-201ENST00000613270 256 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 AC000123.2-201ENST00000623124 461 ntBASIC1.19□□□□□ -2.22
CSMD3Q7Z407 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CSMD3Q7Z407 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 MTCYBP7-201ENST00000419540 1134 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC008571.1-201ENST00000467232 300 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 OR10AB1P-201ENST00000609613 938 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC098679.5-201ENST00000624394 571 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 WWP1P1-201ENST00000466609 2769 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 MIR124-3-201ENST00000384866 87 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 MIR598-201ENST00000384868 97 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 RNA5SP105-201ENST00000391123 113 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 POLHP1-201ENST00000411806 470 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 SNORA50A-202ENST00000629536 136 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 CFTRP2-201ENST00000634304 199 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AL133216.2-202ENST00000634512 349 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC138649.5-201ENST00000637456 137 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 RPL7P46-201ENST00000425129 740 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AL138799.3-201ENST00000438968 350 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 SUMO2P6-201ENST00000505273 288 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.18□□□□□ -2.22
CSMD3Q7Z407 AC000367.1-201ENST00000452711 1766 ntBASIC1.18□□□□□ -2.22
CSMD3Q7Z407 RNU6-1032P-201ENST00000384100 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms