Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-11P-201ENST00000364234 107 ntBASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 AC011712.1-201ENST00000588959 234 ntBASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 AC105429.2-201ENST00000610567 517 ntBASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 MIR4278-201ENST00000636094 69 ntBASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CSPG4Q6UVK1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 XKRY2-202ENST00000623874 1581 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 XKRY-202ENST00000624960 1581 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 RAD23BP2-201ENST00000416003 1207 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 SNRPGP3-201ENST00000469405 227 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 MTCYBP17-201ENST00000503579 789 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 IGKV2D-36-201ENST00000518643 226 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC008015.1-201ENST00000555505 465 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 MIR4448-201ENST00000584360 86 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 OR4G1P-201ENST00000588632 938 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC000367.1-201ENST00000452711 1766 ntBASIC1.42□□□□□ -2.18
CSPG4Q6UVK1 AC011155.1-201ENST00000316512 456 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AL138785.1-201ENST00000425821 331 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AL645568.3-201ENST00000433683 316 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC244505.5-201ENST00000443639 207 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC011979.1-201ENST00000472300 483 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 SNX5P1-201ENST00000505757 1041 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC103810.1-201ENST00000579873 453 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 BX649567.1-201ENST00000642071 1134 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 OR4G11P-202ENST00000642116 1414 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 U3.15-201ENST00000365398 212 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AMD1P1-201ENST00000457220 922 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 RPS29P1-201ENST00000465274 159 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC012181.1-201ENST00000479895 423 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC034244.1-201ENST00000507687 207 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 RNU6-1223P-201ENST00000517124 104 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC124283.4-201ENST00000581815 456 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC103987.3-201ENST00000582071 292 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 AC083899.3-201ENST00000603413 594 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 KATNBL1P1-201ENST00000605192 748 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSPG4Q6UVK1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 DYNLT3P1-201ENST00000378574 347 ntBASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 TAS2R15P-201ENST00000390674 928 ntBASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 RPL34P26-201ENST00000445636 354 ntBASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 CALM1P2-201ENST00000452941 448 ntBASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 AC016727.2-201ENST00000603988 621 ntBASIC1.4□□□□□ -2.18
CSPG4Q6UVK1 RNU4-51P-201ENST00000364206 140 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 SNORA51.12-201ENST00000384448 134 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 MIR625-201ENST00000385047 85 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 RNU2-37P-201ENST00000410695 177 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 UBE2V1P6-201ENST00000430840 422 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 MED6P1-201ENST00000439659 713 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 BNIP3P2-201ENST00000441221 577 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 MIR3618-201ENST00000580330 88 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 MIR502-201ENST00000606349 86 ntBASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.4□□□□□ -2.19
CSPG4Q6UVK1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 RNA5SP338-201ENST00000410495 85 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 AF274854.1-201ENST00000413236 615 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 XKRYP4-201ENST00000414395 483 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 SETP8-201ENST00000435341 628 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 XKRYP5-201ENST00000449659 483 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 AC096992.1-201ENST00000459808 709 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 ATG10-AS1-201ENST00000504846 648 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 RNU2-58P-201ENST00000516403 183 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 Y_RNA.681-201ENST00000516445 113 ntBASIC1.39□□□□□ -2.19
CSPG4Q6UVK1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms