Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNU6-1207P-201ENST00000384343 107 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 RNU6-636P-201ENST00000384598 107 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 Y_RNA.548-201ENST00000384656 105 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AL356421.1-201ENST00000403255 413 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC063979.1-201ENST00000415539 377 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 BX119904.4-201ENST00000424402 301 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 RPL7P46-201ENST00000425129 740 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 MTND1P31-201ENST00000449206 961 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 SNRPGP6-201ENST00000451124 220 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 UQCRHP3-201ENST00000451503 251 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 MTND2P24-201ENST00000453434 806 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 RN7SL75P-201ENST00000461926 281 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AL049874.1-201ENST00000489560 388 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 GMPSP1-201ENST00000514075 579 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 SNORA31.22-201ENST00000517204 135 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AP000867.2-201ENST00000532468 320 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 DNAJC8P1-201ENST00000554535 372 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 GLUD1P4-201ENST00000590914 418 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC073657.2-201ENST00000605661 303 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC069200.1-201ENST00000609511 323 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AL392048.1-201ENST00000613946 534 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 FAM35BP-202ENST00000497389 3337 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 MTND5P27-201ENST00000428871 1720 ntBASIC2.9□□□□□ -1.95
NIPAL3Q6P499 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.9□□□□□ -1.95
NIPAL3Q6P499 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 RNU6-1027P-201ENST00000383998 107 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC245054.2-201ENST00000415639 319 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 MTCYBP38-201ENST00000417160 1123 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC018630.2-202ENST00000422992 927 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 PPP1R11P2-201ENST00000423543 382 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 RPL7L1P10-201ENST00000427790 463 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC009237.8-201ENST00000445492 379 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 PTENP1-201ENST00000447117 1215 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 RN7SL601P-201ENST00000471221 293 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC092185.1-201ENST00000491371 97 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC110794.1-201ENST00000505816 425 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC074250.1-201ENST00000511117 192 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC010587.2-201ENST00000511727 448 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC024589.1-201ENST00000512207 263 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 OR7K1P-201ENST00000546439 926 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 TRAV37-201ENST00000553906 342 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC090695.1-201ENST00000561269 1222 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC022662.1-201ENST00000580252 331 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 RPP40P2-201ENST00000603596 712 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 MIR4275-201ENST00000636486 87 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC011477.1-204ENST00000623416 1325 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.89□□□□□ -1.95
NIPAL3Q6P499 AC093831.2-201ENST00000624393 3427 ntBASIC2.89□□□□□ -1.95
NIPAL3Q6P499 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NIPAL3Q6P499 RNU6-799P-201ENST00000363567 107 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 RNU6-289P-201ENST00000364093 107 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
NIPAL3Q6P499 RNVU1-14-201ENST00000384770 164 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 U3.19-201ENST00000390893 196 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 MTCO2P23-201ENST00000425216 680 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.88□□□□□ -1.95
NIPAL3Q6P499 DPPA2P1-201ENST00000428060 556 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.88□□□□□ -1.95
NIPAL3Q6P499 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.88□□□□□ -1.95
NIPAL3Q6P499 PAXBP1P1-201ENST00000449315 447 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 AC093392.2-201ENST00000450682 337 ntBASIC2.88□□□□□ -1.95
NIPAL3Q6P499 USP9YP10-201ENST00000454868 628 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms