Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 PIGPP3-201ENST00000425307 415 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 FTH1P1-201ENST00000437933 532 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AL162388.1-201ENST00000450912 352 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AL356981.1-201ENST00000454879 684 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC022493.2-201ENST00000506122 481 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 COX6B1P5-201ENST00000509843 249 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 FTH1P21-201ENST00000512179 511 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RPS27AP18-201ENST00000515536 459 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RNA5SP464-201ENST00000516251 108 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RNU4-77P-201ENST00000516692 156 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 RN7SKP260-201ENST00000516907 149 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 MIR3910-1-201ENST00000580936 111 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC068790.4-201ENST00000602474 263 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 MIR6758-201ENST00000620653 63 ntBASIC5.25□□□□□ -1.57
RNF43Q68DV7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF43Q68DV7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF43Q68DV7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNF43Q68DV7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU6-770P-201ENST00000363929 105 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU5A-8P-201ENST00000364102 114 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 Y_RNA.222-201ENST00000364264 102 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNA5SP455-201ENST00000365190 119 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 Y_RNA.483-201ENST00000384380 101 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU6-729P-201ENST00000384399 107 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 Y_RNA.555-201ENST00000384673 110 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 MIR649-201ENST00000384843 97 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RPL21P1-201ENST00000399532 476 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 MIR1302-6-201ENST00000408466 90 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU2-23P-201ENST00000410545 195 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC119751.6-201ENST00000416712 186 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC068287.1-201ENST00000430283 295 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 BX323845.1-201ENST00000432417 179 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC079804.1-201ENST00000461922 436 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 OR7H2P-201ENST00000513483 306 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC108471.1-201ENST00000513977 287 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU6-475P-201ENST00000516073 104 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU6-189P-201ENST00000516120 101 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNA5SP43-201ENST00000516559 110 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNU6-182P-201ENST00000516970 105 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 SOD1P3-201ENST00000518682 454 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC008033.2-201ENST00000542626 177 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 ATP5J2P6-201ENST00000565203 266 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AL020997.2-201ENST00000602607 184 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC105254.2-201ENST00000603636 436 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC083809.1-201ENST00000615051 472 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC103705.1-201ENST00000619013 241 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 SOCS5P3-201ENST00000425115 1576 ntBASIC5.24□□□□□ -1.57
RNF43Q68DV7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF43Q68DV7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF43Q68DV7 IRF5P1-201ENST00000504852 2164 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.23□□□□□ -1.57
RNF43Q68DV7 AC126323.6-202ENST00000568092 3511 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF43Q68DV7 Y_RNA.14-201ENST00000362415 103 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RN7SKP95-201ENST00000362860 303 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RNU6-179P-201ENST00000363350 107 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RNU6-200P-201ENST00000364743 107 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RNA5SP428-201ENST00000365129 132 ntBASIC5.23□□□□□ -1.57
RNF43Q68DV7 RNU6-441P-201ENST00000384545 106 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms