Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXF1Q12946 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC121161.1-201ENST00000510606 652 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.09□□□□□ -2.07
FOXF1Q12946 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC024224.1-201ENST00000538284 609 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 DNAJC8P1-201ENST00000554535 372 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC079148.1-201ENST00000565944 819 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC023824.3-201ENST00000569003 562 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC074051.3-201ENST00000570238 358 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 MIR5007-201ENST00000583098 95 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC079089.3-201ENST00000603094 673 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC009220.3-201ENST00000604318 586 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 HSPE1P14-201ENST00000605812 302 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC112503.2-201ENST00000609005 552 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AC068722.2-201ENST00000618734 544 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AL360181.4-201ENST00000621752 134 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC093875.1-201ENST00000623688 504 ntBASIC2.09□□□□□ -2.07
FOXF1Q12946 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.09□□□□□ -2.07
FOXF1Q12946 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.09□□□□□ -2.07
FOXF1Q12946 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.09□□□□□ -2.08
FOXF1Q12946 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
FOXF1Q12946 AC006020.1-201ENST00000420179 1854 ntBASIC2.09□□□□□ -2.08
FOXF1Q12946 AC090740.1-201ENST00000623193 2262 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXF1Q12946 DBF4P1-201ENST00000412976 1892 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
FOXF1Q12946 RNU6-921P-201ENST00000384361 107 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 RNU6-821P-201ENST00000390995 107 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AL121978.1-201ENST00000402778 359 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 FO393413.1-201ENST00000402892 195 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 RPS4XP7-201ENST00000406274 780 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC107081.1-201ENST00000414975 361 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 SUMO1P4-201ENST00000429430 302 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 TRBV26-201ENST00000456572 344 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC008379.1-201ENST00000463655 464 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.08□□□□□ -2.08
FOXF1Q12946 RPS4XP6-201ENST00000477670 797 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
FOXF1Q12946 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
FOXF1Q12946 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
FOXF1Q12946 SEM1P1-201ENST00000506694 209 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 MTCO3P44-201ENST00000510977 541 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXF1Q12946 HMGB1P1-201ENST00000522557 636 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 MTCYBP20-201ENST00000524239 1129 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AL512310.1-201ENST00000548639 172 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AL021368.1-201ENST00000607490 540 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXF1Q12946 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC002064.3-201ENST00000623448 346 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXF1Q12946 AC090897.3-201ENST00000636973 1157 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 AC233263.6-201ENST00000631132 1963 ntBASIC2.08□□□□□ -2.08
FOXF1Q12946 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXF1Q12946 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXF1Q12946 SGO1P2-201ENST00000429458 1589 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
FOXF1Q12946 MIR16-2-201ENST00000362117 81 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 RNU6-1249P-201ENST00000363237 111 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 SNORA14A-201ENST00000364773 135 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 RNU6-549P-201ENST00000384433 107 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 MIR649-201ENST00000384843 97 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 SNORD65C-201ENST00000390962 71 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 MTND1P23-201ENST00000416931 372 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 Z93242.1-201ENST00000427102 353 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 MTATP6P4-201ENST00000427725 675 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 UBE2V1P6-201ENST00000430840 422 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
FOXF1Q12946 MTCYBP34-201ENST00000439552 670 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 AC009901.1-201ENST00000506703 541 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 ARL2BPP5-201ENST00000523141 481 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 AC022690.1-201ENST00000526681 550 ntBASIC2.07□□□□□ -2.08
FOXF1Q12946 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms